LOCUS BC048212 1309 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ninjurin 1, mRNA (cDNA clone MGC:52234 IMAGE:5806415),
complete cds.
ACCESSION BC048212
VERSION BC048212.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1309)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1309)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: n Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543289.
FEATURES Location/Qualifiers
source 1..1309
/db_xref="H-InvDB:HIT000053304"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52234 IMAGE:5806415"
/tissue_type="Lung, epidermoid carcinoma"
/clone_lib="NIH_MGC_101"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1309
/gene="NINJ1"
/gene_synonym="NIN1"
/gene_synonym="NINJURIN"
/db_xref="GeneID:4814"
/db_xref="HGNC:HGNC:7824"
/db_xref="MIM:602062"
CDS 72..530
/gene="NINJ1"
/gene_synonym="NIN1"
/gene_synonym="NINJURIN"
/codon_start=1
/product="ninjurin 1"
/protein_id="AAH48212.1"
/db_xref="GeneID:4814"
/db_xref="HGNC:HGNC:7824"
/db_xref="MIM:602062"
/translation="MDSGTEEYELNGGLPPGTPGSPDASPARWGWRHGPINVNHYASK
KSAAESMLDIALLMANASQLKAVVEQGPSFAFYVPLVVLISISLVLQIGVGVLLIFLV
KYDLNNPDKHAKLDFLNNLATGLVFIIVVVNIFITAFGVQKPLMDMAPQQ"
BASE COUNT 281 a 444 c 361 g 223 t
ORIGIN
1 cgcagctgga gcctgcggct gaggctcggg cgcgctcagg cccggatcct ggcggcctgg
61 gcggccgcac catggactcg ggaaccgagg agtacgagct caacggcggc ctgcctccgg
121 gcacacccgg ctccccggac gcctcgccgg cccgctgggg ctggaggcac gggcccatca
181 acgtgaacca ttacgccagc aagaagagcg cagccgagag catgctggac atcgcgctgc
241 tgatggccaa cgcgtcccag ctgaaggccg tcgtggaaca gggccccagc ttcgccttct
301 atgtgcccct ggtggtcctc atctccatct cccttgtgct gcagatcggc gtgggggtgc
361 tgctcatctt ccttgtcaag tacgacctta acaacccgga caagcacgcc aagctggact
421 tcctcaacaa cctggccacg ggcctggtgt tcatcatcgt ggtagtcaac atcttcatca
481 cggccttcgg ggtccagaag cccttgatgg acatggcacc ccagcagtag gacacccagg
541 accctggatg ctgcctgccc tgcaactcag ctgcccgacc ccaggagtcg ccatacctgt
601 gaggtgtcca cctccctgca catggcacta cccagactgc cagagcccag gctggcctca
661 tctgcaccat gtccccggac cagcccttgc tctgactgcg gccaagcacc acgcaggagg
721 ccactcttgt ctctcagcag ctgttcccag gaggcagctc cctcctggca catgggggct
781 ggccacaata gcccagaggg tcagaactgg acagctgcag agacctgtgc ccagagaagg
841 gtctcgaccc actcaaggac acacagcagg tccgtggatg ggctggatga gtgaccaggg
901 ccagcctctg tctcaggaca ttccagaagg acaaggagat gtctctccct ctcccaaagc
961 accagcgtcc ctgcctcccg tgggccctgt ccgggttgcc ctggtgaccc cagcctctgt
1021 ccacttccta acccagggac cctgcacagc cagaactgcc tttggcccta cggatggcca
1081 ctggctctgg tctaaagtgc ctgggcttgg tggccatcaa gagggagcca gtcaggcctg
1141 tgagggccgt agaccttgta tataccctgc accagcagtg accgggcaga gcccaacccc
1201 ctccacgggg gtcccagcac ccacttttct aatcatgaat gaacaataaa gcccacgctc
1261 tttgtcaggc tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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