LOCUS BC048121 1646 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens placenta-specific 1-like, mRNA (cDNA clone MGC:57403
IMAGE:5266642), complete cds.
ACCESSION BC048121
VERSION BC048121.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1646)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1646)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: j Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42476002.
FEATURES Location/Qualifiers
source 1..1646
/db_xref="H-InvDB:HIT000053298"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57403 IMAGE:5266642"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1646
/gene="PLAC1L"
/gene_synonym="FLJ36198"
/db_xref="GeneID:219990"
/db_xref="HGNC:HGNC:26699"
CDS 186..662
/gene="PLAC1L"
/gene_synonym="FLJ36198"
/codon_start=1
/product="placenta-specific 1-like"
/protein_id="AAH48121.1"
/db_xref="GeneID:219990"
/db_xref="HGNC:HGNC:26699"
/translation="MALEVLMLLAVLIWTGAENLHVKISCSLDWLMVSVIPVAESRNL
YIFADELHLGMGCPANRIHTYVYEFIYLVRDCGIRTRVVSEETLLFQTELYFTPRNID
HDPQEIHLECSTSRKSVWLTPVSTENEIKLDPSPFIADFQTTAEELGLLSSSPNLL"
BASE COUNT 518 a 281 c 301 g 546 t
ORIGIN
1 aatcgagaga gtctcagcct ttaggtagct gacactgtga taagagcatc ctgtgaacta
61 cccaaataag gaggaaaacg aacgcagctg agcatgggat gccatataaa aatcacttaa
121 accagtcgcc actccttgtt tcctgagttg ccctgtgctg gaggtctgct cagacgaagg
181 tctccatggc gttagaagtc ttgatgctcc tcgctgtctt gatttggacc ggtgctgaga
241 acctccatgt gaaaataagt tgctctctgg actggttgat ggtctcagtt atcccagttg
301 cagaaagcag aaatctgtat atatttgcgg atgaattaca tctgggaatg ggctgccctg
361 caaatcggat acatacatat gtatatgagt ttatatatct tgttcgtgat tgtggcatca
421 ggacaagggt agtttctgag gaaactctcc tttttcaaac cgagctgtac tttaccccaa
481 ggaatataga tcatgaccct caggaaatcc atttggagtg ttccacctct aggaaatcag
541 tgtggcttac accagtttct actgagaatg aaataaaatt ggatcctagt ccttttattg
601 ctgactttca gacaacagca gaagagttag gattattatc ttctagtcca aacttgctct
661 gagctaaagg agaaatggaa acttgaagct ggtgttatgt attttgcagg aaaacagttt
721 cattttttca tagcaaaaat atagttggtg tatatctctc cttaagtctc tggtttctaa
781 aaaccctact tcagtaaagg tcctgattag ttgattagtg aatgtgtatt tctaaatatt
841 tgtattcagt aggggtatgg ctgattaatt taacattaac tattaggtaa ttcatattat
901 acatttaagt tctttctgtt ctgtgtagaa gattcagaaa tatgtcttca aagacaatga
961 cttgatctaa ttgataagaa cctccaataa atatgttcta atatttttca ggaagaataa
1021 agaatagaga gagacatata aatgtgcaag aggcaaaact ttgagcatag tgtaaaattt
1081 aacatattaa ctctcacgaa aggcaaaatc cttttatgtg cagatacttt aattcatgta
1141 gattttccta ttaatcagta aagttgaatc ctaacaataa tgccatgtga caacctattt
1201 agattattcc agaattaaat tcaatttatt ttctagagct caagtaacca ctaccttaac
1261 tgaaatttga tgttaggttt cccttgttcc tccgaatggt tcttccacac tcaaaataat
1321 tgaatggttg agttggttaa gcaaagagtt atcctgccac ctaagagcat tcattaaatg
1381 attatttatt accacctact ttatactatc ttcctttctt taaacatgga gtctaaatat
1441 gtaatatatc aaaaaatact tctgatttgg tagatttctt atatcaaggg tgagaattga
1501 actgtgccat tggctattca atagcttatt gaatgtatgt tttggatgcc acatcctcct
1561 ggaagcaaat tttgccaaga tactgtttat tattattttt aattaaagtg atactattcc
1621 attttcaatt aaaaaaaaaa aaaaaa
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