LOCUS BC047890 3361 bp mRNA linear HTC 30-MAR-2005
DEFINITION Homo sapiens ubiquitination factor E4B (UFD2 homolog, yeast), mRNA
(cDNA clone IMAGE:5492405), containing frame-shift errors.
ACCESSION BC047890
VERSION BC047890.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3361)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3361)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: e Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38327033
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..3361
/db_xref="H-InvDB:HIT000098819"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5492405"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 896 a 837 c 776 g 852 t
ORIGIN
1 atgcaattct gaaacctccc ccattcgggg gaccagacag cctgatagac accttccact
61 ctccttcctc ccgccgtggt ctcgagaaca gaaggatctc tccttaacgc ctttcaccat
121 taagaggaaa gcgatggagg agctgagcgc tgatgagatt cgacggaggc gccttgcacg
181 acttgctggt ggacagacct ctcagccaac caccccactc acctctcccc agagggagaa
241 ccctccgggg cctcccatag cggcatcagc cccaggaccc tctcagagtc ttggtctcaa
301 tgtccacaac atgaccccag ctacctcccc aataggtgca tcaggagtag cccatcgaag
361 ccagagcagt gaaggagtca gttctctcag cagctcgccc tctaatagcc ttgaaacgca
421 atctcagtct ctctcacgtt cccagagcat ggatatcgat ggtgtctcat gtgagaaaag
481 catgtcccag gtggatgtgg attcaggaat tgaaaacatg gaggttgatg aaaatgatcg
541 aagagaaaag cggagcctca gtgataagga gccttcctcg ggccctgaag tgtctgaaga
601 gcaggcctta cagctggtct gtaagatctt ccgtgtctct tggaaggacc gggacagaga
661 tgtcatcttt ctttcttctc tttctgcaca gtttaagcag aacccaaaag aagtattctc
721 cgattttaag gacttgattg gccagatttt aatggaagtg ctaatgatgt ccactcagac
781 cagagatgaa aacccatttg ccagtctgac agccacatca cagccaattg ctgcagcagc
841 acggtcacca gacagaaatc tcttgctaaa cactggctcc aatccaggaa caagccccat
901 gttctgcagc gtggcttcct ttggtgccag ctctttgtct agtttgggag cctctggtgg
961 agcaagtaat tgggattcct acagtgacca tttcaccatt gaaacctgca aagagacaga
1021 tatgctgaac tacctcatcg agtgtttcga ccgagttgga atagaggaaa aaaaagcacc
1081 aaagatgtgc agccagccag cagtcagcca gcttctgagc aacatccgct cacagtgcat
1141 atcccatact gctttagtac tacaaggctc cctaacacag cccaggtcct tgcagcagcc
1201 gtccttccta gtgccgtata tgctgtgtag gaatctccca tatggcttca ttcaggaact
1261 ggtgagaacc actcaccagg atgaagaagt gttcaagcag atatttatcc ccattttaca
1321 aggcctggct cttgctgcca aagagtgctc cctcgacagt gactacttta aataccccct
1381 catggcacta ggtgagctct gtgaaaccaa gtttgggaag acacaccctg tgtgcaattt
1441 ggttgcttct ttgcggttgt ggttgccgaa atccttaagt cctggctgtg ggcgggagct
1501 gcagagactc tcttacttag gggctttctt tagcttctca gtctttgcag aagatgatgt
1561 taaagtggtt gaaaaatact tctcagggcc tgccattacc ctggaaaaca ctcgtgtggt
1621 tagccaatca ttgcagcatt acttagagct cggaaggcaa gagcttttta agattctgca
1681 tagtattttg ttaaatggcg aaacccgtga ggctgctctc agttacatgg cggctgtcgt
1741 caatgccaat atgaagaaag cacagatgca gacagatgat agattggtgt ctacagatgg
1801 atttatgctg aatttccttt gggtactgca gcagctaagt acaaaaatca agttagaaac
1861 agttgatccc acgtatattt ttcacccaag atgtcggatt actcttccca atgatgagac
1921 gcgtgtgaat gcaacgatgg aagatgtgaa tgactggctg actgaactct atggcgatca
1981 gcctccattt tctgagccga aattccctac ggagtgcttc tttctcaccc tgcatgctca
2041 ccacctctct attctgccta gttgccgtcg ctatatccgc agactccggg ctatccggga
2101 gctcaataga actgtagaag atttgaaaaa taatgaaagc caatggaaag attccccact
2161 ggcaactaga caccgcgaaa tgctgaagcg ctgtaaaact cagcttaaga aactggtacg
2221 gtgcaaggcc tgtgctgatg ctggcctact tgacgagagc ttcctgagaa gatgtctgaa
2281 tttttatggc cttctcattc agctgctgct ccgcatcctg gaccccgcat atcccgatat
2341 aacactgcct ttaaattcag atgtccccaa ggtatttgca gcgttgcctg agttttatgt
2401 agaagatgtt gcagaatttt ttatttttta ttgtacaata ctctccccag gcgctttatg
2461 agccctgtac tcaggatatt gtgatgttcc ttgttgtgat gttgtgcaac cagaactaca
2521 tccgaaaccc atatttggtg gccaaactgg tagaagtcat gtttatgacc aaccctgctg
2581 ttcagccacg aacccagaag ttttttgaaa tgattgagaa ccatcctctc tccaccaagt
2641 tgttggtacc ttccctgatg aagttttata cagatgttga gcataccgga gccaccagtg
2701 agttttatga caagttcaca attcgctatc atattagcac catttttaaa agcctttggc
2761 aaaacatagc tcaccatggc acctttatgg aggagttcaa ctccgggaag cagtttgttc
2821 gctatataaa catgttgata aacgacacga cgtttttgct cgatgaaagt ctggagtctc
2881 tgaagcgaat ccatgaagtg caggaagaga tgaagaacaa agaacagtgg gaccagttgc
2941 cccgggatca gcagcaggct cgtcagtctc agcttgctca ggatgagcgt gtgtcccgct
3001 cttacctcgc cctggccacc gaaaccgtgg acatgttcca catcctcacg aagcaggtcc
3061 agaagccctt cctcagaccg gagcttggac cccgattggc tgcaatgctg aactttaatc
3121 ttcagcaact ttgtggcccc aagtgccgtg acctgaaagt tgaaaaccct gagaaatacg
3181 gctttgaacc aaagaagctg ttggaccaac tgacggatat ttacttacag ctggactgtg
3241 ctcggttcgc gaaagccatt gctgacgacc agagatccta cagtaaggaa ttgtttgaag
3301 aagttatttc aaagatgcgg aaggcaggga tcaaatccac aatagcaaaa aaaaaaaaaa
3361 a
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