LOCUS BC047880 3090 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens isoleucyl-tRNA synthetase 2, mitochondrial, mRNA (cDNA
clone IMAGE:4444230), partial cds.
ACCESSION BC047880
VERSION BC047880.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3090)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3090)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: b Column: 12.
FEATURES Location/Qualifiers
source 1..3090
/db_xref="H-InvDB:HIT000098812"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4444230"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3090
/gene="IARS2"
/db_xref="GeneID:55699"
/db_xref="HGNC:HGNC:29685"
CDS <1..2670
/gene="IARS2"
/codon_start=1
/product="IARS2 protein"
/protein_id="AAH47880.3"
/db_xref="GeneID:55699"
/db_xref="HGNC:HGNC:29685"
/translation="VGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSE
LGREAQNLSAMEIRKKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLR
TFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLA
SLIDGSSPVSILVWTTQPWTIPANEAVCYMPESKYAVVKCSKSGDLYVLAADKVASVA
STLETTFETISTLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGM
EDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEE
KLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMD
RRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQTTEHIVKLVEQHGSDIWWTLPPEQL
LPKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWSYVLPGPDQRADLYLEGKDQLGGW
FQSSLLTSVAARKRAPYKTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEP
PYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSI
PVNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDR
LYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIPYIKEPKSVFRTGW
ISTSSIWKKPGLEEAVESACAMRDSFLGSIPGKNAAEYKVITVIEPGLLFEIIEMLQS
EETSSTSQLNELMMASESTLLAQEPREMTADVIELKGKFLINLEGGDIREESSYKVIV
MPTTKEKCPRCWKYTAESSDTLCPRCAEVVSGK"
BASE COUNT 940 a 551 c 701 g 898 t
ORIGIN
1 gttggacatg ctttaaataa gattttgaaa gacatagcca atcgattcca tatgatgaat
61 ggctccaaaa tacattttgt gcccggctgg gattgtcatg ggttgcccat tgaaataaaa
121 gtattatcag aacttggtag agaagctcag aatctttcag ctatggaaat tagaaagaaa
181 gctagatcat ttgctaaagc agccattgag aaacagaaat cagcatttat tcgttgggga
241 ataatggcag attggaataa ttgctactat acatttgatg ggaagtatga agccaaacag
301 ttgagaactt tttaccaaat gtatgataag ggcttggttt atcgatctta caaacctgtg
361 ttttggtctc cgtcatctag gactgcattg gctgaagcag aacttgaata taatcctgag
421 catgtcagtc gttcaatata tgtaaaattt cctctcttaa agccttctcc aaaattggca
481 tctcttatag atggttcatc tcctgttagt attttggtct ggaccacaca accttggacg
541 attccagcca atgaagctgt ttgctatatg cctgaatcaa agtatgctgt tgtgaaatgt
601 tctaagtctg gagacctcta cgtactggcg gcagataaag tagcatctgt tgcttctact
661 ttggaaacaa catttgagac tatttcaaca ctttcaggtg tagatttgga aaatggtact
721 tgcagtcatc cattaattcc tgataaagcc tctcctcttt tacctgcaaa tcatgtgacc
781 atggcaaaag gaacgggatt ggttcacaca gccccagctc atggtatgga agactacggt
841 gtagcgtctc agcacaacct gcccatggat tgtctagtgg acgaagatgg agttttcaca
901 gatgttgcag gtcctgaact tcaaaacaag gctgtccttg aagagggaac tgatgtggtt
961 ataaagatgc ttcagactgc aaagaatttg ttgaaagagg agaaattggt gcatagctat
1021 ccgtatgact ggaggaccaa gaaacctgtg gttattcgtg ccagcaagca gtggtttata
1081 aacatcacgg atattaagac tgcagccaag gaattgttaa aaaaggtgaa atttattcct
1141 ggatcagcac tgaatggcat ggttgaaatg atggacaggc ggccatattg gtgtatatca
1201 aggcaaagag tttggggtgt tccaattcct gtgtttcatc ataagaccaa ggatgaatac
1261 ttgatcaaca gccaaaccac tgagcatatt gttaaactag tggaacaaca cggcagtgat
1321 atctggtgga ctcttccccc tgaacaactt cttccaaaag aagtcttatc tgaggttggt
1381 ggccctgatg ccttggaata tgtgccaggt caggatattt tggacatctg gtttgatagc
1441 ggaacttcat ggtcttatgt tcttccaggt cctgaccaaa gagcagattt gtacttggaa
1501 ggaaaagacc agctcggggg ttggtttcag tcatccttat taacaagtgt ggcagcaagg
1561 aagagagcac cttataagac agtgattgtt catggattta cccttggaga aaagggagaa
1621 aagatgtcca agtctcttgg gaatgtcatt catcctgatg ttgtcgttaa tggaggacaa
1681 gatcaaagca aagagcctcc gtatggtgct gatgtccttc gctggtgggt agctgattcc
1741 aatgtcttca ccgaagttgc aattggccca tccgtgctca atgctgccag agatgatatt
1801 agcaagctta ggaatacact tcgctttctt ttgggaaatg tggctgattt caacccagaa
1861 acagattcca tccctgtaaa cgatatgtat gtcatagacc agtacatgct acacttactg
1921 caggatttgg caaacaagat taccgaatta tacaaacaat atgattttgg aaaagttgtt
1981 cggctgttac ggacgtttta taccagagag ctctctaact tttatttcag tataatcaaa
2041 gataggctct attgtgaaaa ggaaaatgac cccaaacgac gctcttgtca gactgcatta
2101 gttgaaattt tggatgtaat agttcgttct tttgctccca ttcttcctca cctggctgaa
2161 gaggtgttcc agcacatacc ttatattaaa gagcccaaga gtgttttccg tactgggtgg
2221 attagtacta gttctatctg gaaaaagccc gggttggaag aagctgtgga gagtgcgtgt
2281 gcaatgcgag actcatttct tggaagcatc cctggcaaaa atgcagctga gtacaaggtt
2341 atcactgtga tagaacctgg actgcttttt gagataatag agatgctgca gtctgaagag
2401 acttccagca cctctcagtt gaatgaatta atgatggctt ctgagtcaac tttactggct
2461 caggaaccac gagagatgac tgcagatgta atcgagctta aagggaaatt cctcatcaac
2521 ttagaaggtg gtgatattcg tgaagagtct tcctataaag taattgtcat gccgactacg
2581 aaagaaaaat gcccccgttg ttggaagtat acagcggagt cttcagatac actgtgtcct
2641 cgatgtgcag aagttgtcag tggaaaatag tattaacagc tcactcgagc aagaaccctc
2701 ctgacagtac tggctagaag tttggatgga ttatttacaa tataggaaag aaagccaaga
2761 tttaggtaat gagtggatga gtaaatggtg gaggatggga gtcaaaatca gaattataga
2821 agaagtattt cctgtaacta tagaaagaat tatgtatata tacatgcaga aatatatatg
2881 tgtgtgtgta tctgtggatg gatatatgta tatctcttcc tatatatatc catagtggac
2941 ttattcagaa catagatatg tattcagctt gtcttcaaat acggccaagc agaaaatgtt
3001 ttatatttta taaatcatct tttgactctg tatttaaatt ctatgatact gaaaataaag
3061 gcattctgga aaaataaaaa aaaaaaaaaa
//