LOCUS BC047768 1793 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RNA binding motif protein, Y-linked, family 1, member
A1, mRNA (cDNA clone MGC:54233 IMAGE:5744153), complete cds.
ACCESSION BC047768
VERSION BC047768.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1793)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1793)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: d Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34303936.
FEATURES Location/Qualifiers
source 1..1793
/db_xref="H-InvDB:HIT000053246_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54233 IMAGE:5744153"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1793
/gene="RBMY1A1"
/gene_synonym="RBMY"
/gene_synonym="YRRM1"
/gene_synonym="YRRM2"
/db_xref="GeneID:5940"
/db_xref="HGNC:HGNC:9912"
/db_xref="MIM:400006"
CDS 370..1440
/gene="RBMY1A1"
/gene_synonym="RBMY"
/gene_synonym="YRRM1"
/gene_synonym="YRRM2"
/codon_start=1
/product="RNA binding motif protein, Y-linked, family 1,
member A1"
/protein_id="AAH47768.1"
/db_xref="GeneID:5940"
/db_xref="HGNC:HGNC:9912"
/db_xref="MIM:400006"
/translation="MSYSRGLIPVKRGPSSRSGGPPPKKSAPSAVARSNSWMGSQGPM
SQRRENYGVPPRRATISSWRNDRMSTRHDGYATNDGNHPSCQETRDYAPPSRGYAYRD
NGHSNRDEHSSRGYRNHRSSRETRDYAPPSRGHAYRDYGHSRRDESYSRGYRNRRSSR
ETREYAPPSRGHGYRDYGHSRRHESYSRGYRNHPSSRETRDYAPPHRDYAYRDYGHSS
WDEHSSRGYSYHDGYGEALGRDHSEHLSGSSYRDALQRYGTSHGAPPARGPRMSYGGS
TCHAYSNTRDRYGRSWESYSSCGDFHYCDREHVCRKDQRNPPSLGRVLPDPREACGSS
SYVASIVDGGESRSEKGDSSRY"
BASE COUNT 591 a 333 c 406 g 463 t
ORIGIN
1 cttccctctc agggaagctc cagctgtccc tcccgcagtt ggccctgtgg tgttccgaag
61 ccggttacgt acggcctgag ggccaggcga acctcaggct ctttgtccta ctaaaaagcg
121 cagcacaatg gtagaagcag atcatcctgg caagcttttc attggtggcc tcaatagaga
181 aaccaatgag aagatgctta aagcagtatt tgggaaacat ggtcccatat cagaagttct
241 tttgataaag gatcgaacca gcaaatccag aggctttgca tttattactt ttgagaaccc
301 tgcagatgct aagaatgctg ccaaagatat gaatggaaag atgatggtgg atacactcct
361 gatctcaaga tgagttattc taggggactc attccagtta aaagaggtcc atcttcaaga
421 agtggaggtc ctcctccgaa aaaatctgct ccttctgctg tggcaagaag caatagttgg
481 atgggaagcc aaggtcccat gtcacaaaga agagagaatt atggagttcc tccacgcaga
541 gcgacaatat cttcctggag aaatgatcgc atgtcaacaa gacatgatgg ttatgcaact
601 aacgatggaa atcatccaag ttgccaagaa acgagggatt atgctccacc atctagaggc
661 tatgcatacc gtgataatgg tcattctaat cgggatgaac attcctctag aggatataga
721 aatcatcgaa gttcccgaga aactagggat tatgctccac catctagagg ccatgcatac
781 cgtgattatg gtcattctcg tcgggatgaa agttattcta gaggatacag aaatcgtcga
841 agttcccgag aaactaggga gtatgctcca ccatctagag gccatggata ccgtgattat
901 ggtcattctc gtcgacatga aagttattct agaggatata gaaatcatcc aagttcccga
961 gaaaccaggg attatgctcc accacataga gactatgcat accgtgatta tggtcattct
1021 agttgggatg aacattcctc tagaggatat agttatcatg atggctacgg tgaggccctt
1081 ggtagagatc attctgaaca tctaagtgga agttcttata gagatgcact tcagagatac
1141 gggacctctc atggtgcacc acctgcaaga gggcctcgga tgtcttatgg tggaagcacc
1201 tgccacgcat atagtaatac acgagataga tatggcagaa gttgggagag ttactcgagc
1261 tgtggtgatt ttcattattg tgatcgtgag catgtttgca gaaaagacca aaggaatccg
1321 ccttctctgg gtagggtgct ccctgatcct cgtgaagcat gtggtagctc aagttatgtg
1381 gcatctatag tagatggtgg ggagagtcga tctgaaaaag gagactcgag cagatattaa
1441 agcaagcatt gaaaataata gttattgcat accaatcctt gtttgcaaat caaaaattga
1501 aatgttattt ctgcattgtt acctgcatat tactgaaaga aacatgttgg ttttgtggag
1561 agaggtagat actaacttcc tccatgaatt ttttgaggta ttcaaaggaa aaggaattgt
1621 tttcaaagta atttcatact tgttgatgct atttgaaaag tgtttagatg taatatctac
1681 cttaaaattt tcacaataaa atttgacatg tactgcaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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