LOCUS BC047734 2705 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens protein tyrosine phosphatase, receptor type, G, mRNA
(cDNA clone IMAGE:6188881), complete cds.
ACCESSION BC047734
VERSION BC047734.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2705)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2705)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: l Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18860897
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2705
/db_xref="H-InvDB:HIT000053229"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6188881"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2705
/gene="PTPRG"
/gene_synonym="HPTPG"
/gene_synonym="PTPG"
/gene_synonym="R-PTP-GAMMA"
/gene_synonym="RPTPG"
/db_xref="GeneID:5793"
/db_xref="MIM:176886"
CDS 449..757
/gene="PTPRG"
/gene_synonym="HPTPG"
/gene_synonym="PTPG"
/gene_synonym="R-PTP-GAMMA"
/gene_synonym="RPTPG"
/codon_start=1
/product="PTPRG protein"
/protein_id="AAH47734.1"
/db_xref="GeneID:5793"
/db_xref="MIM:176886"
/translation="MRRLLEPCWWILFLKITSSVLHYVVCFPALTEGYVGALHENRHG
SAVQIRRRKASGDPYWAYSGKSSCSNGDHTGQLTSHSTHLKAHFESLLCLSSVCSNLS
"
BASE COUNT 710 a 557 c 581 g 857 t
ORIGIN
1 ccagtttcca gccccgcgct cttcgttcct tcccagcctg cgccggctct cgggctgtgc
61 tgcgctgccg actcaagttg gggatcctcg gctgctcgcc gccgccgccc gcggtccctg
121 cctgccccag gcccggggca tcgccgccgg ccgccgactc cgcgccctgc ccgatcggct
181 ctctcctttt taaacggaaa gcagcctttc tccgccgaga ggatcgtccc cagcgtggct
241 ctgcgttccc ggtcactttt tgagattttc cggggggcgc tcggcggctt cccggattcc
301 aaggggactc gggccgccga gcgcgggggg cccgtggagc gggcgagccg gggaagcgcc
361 ccggcttagc ggaggctcgc acggaggcaa gaacttattc aacaagttta cctccctgct
421 ttcctctttt cgatgtgcgt tttcggacat gcggaggtta ctggaaccgt gttggtggat
481 tttgttcctg aaaatcacca gttccgtgct ccattatgtc gtgtgcttcc ccgcgttgac
541 agaaggctac gttggggccc tgcacgagaa tagacacggc agcgcagtgc agatccgcag
601 gcgcaaggct tcaggcgacc cgtactgggc ctactctggt aagtccagtt gttctaatgg
661 agatcacaca ggccagttaa catcccattc aactcacttg aaagcacact ttgaatcact
721 tttatgcctg agttctgttt gctcaaatct ttcgtagttc actaaaagtt gaaatattcg
781 agcctgtttt tcctcaaggt tataagcacc ttaatttatc tctaccacct gtttcctcaa
841 cctgttttcc cctcaatttg cgtttatttc tgaactttac tgttaatgag ttattgtacc
901 aaacttgtaa ttttctgaaa gacgtagtct tgtcttttct gttttttcag gggctgtgat
961 ttcagagagc agaaaatata tggctagtct tgagctgcta aatgtctgct aaacattaca
1021 aacatcacat atcagaatgc tctattaggc tctaagccaa gaaatgcaac tttattttta
1081 aatcacatct tgttctttga atatatttta gctgtctact cgatggtaat ctgcagtcct
1141 tttcattttt atttttactt ttaccctttt gagctaatga agggagagag cattgttcta
1201 actatgttga atgttacatt gcaaataatt ttcttacatt ttaaggggac aaaaatgaag
1261 accgaaaact agggatagac ttttctggat taggcttccc aaaactccca aaatatgaga
1321 ggtggattgt tatttctaga agagattttt gatgctcaaa aatatatgga aaatgtatta
1381 aagctaatta aggaatgctt gagtaagata gaccactttg gaaattactt tggcactgaa
1441 taattcaaac tccttctatg aaagagcttg gaggcatgga gtattagtct taataataaa
1501 tctatgtatt atgcaatgtt gttgcatata gaactgaaag tattcttttc ataatgatgc
1561 tcgggtttaa atcctgaatt tctcccagca aatcctgtta aatttatgcc agtgtaaaat
1621 ttataggtct gatctttaat tataccttat ctattggctt tttgcatcct tttgtctatt
1681 gataaatctg ctgcccctgc agggagaata tcctatctgt tttgttttgc agtgaacaga
1741 tagtgattct gaagttttcc atcacaccca gtaccttgtg attagaatta tctaattaga
1801 ggctttttgt caccatttct gataaatgaa ggaaattggc agatgaaagc caaaattaca
1861 tatatatagc atcttgccaa gaaacccaaa gaaaatttat cattttgtac tctgtggctc
1921 tgacatcagt caggaggagg cacaaagtgg cttgctattt acagttcatc agtttagaat
1981 aataatgctg ttagtcagga aattggaagt tatatcccat tagcatgtcc aattgcaaat
2041 ggcagtgaag agatgaaagc ccttaaactt ttcccattat gtagttaaga atgaccataa
2101 gtggtgccat ctttgtgatg gagtgattgt tgatgtcttt aactttggta gagttcagaa
2161 gtctccattt tgtatttctg gaatgcattg tgtctgaatt tgggtattgc ctccagtagt
2221 agaaggacta atggttcaaa ttcaagagtt ggcacacttt ttctgaaaag atccaggtaa
2281 caaacatcaa aagccatgtc gtctttgttg caactgccca actctgccat tgtagcttaa
2341 aagtacccac tgacaattct ggacagactg gctgtgctct gataaaaatt tacttatgaa
2401 tactggaatt tgaattttat aattttcatg tgtcaggaaa tattcttctt ttgatttttt
2461 tctcattcat taaaaaatac acaaaccatt cttgctttgc aggctgtgca aaaacaggtg
2521 gctggttgga tagggtccac aggttatata gtttgtgaac ccttgttcca gttgattttt
2581 ttcctagaaa tcagatagga gagtcatttg aggaattgct tggaaggatg tggactggtt
2641 tggaagactg aatgaagtca tttgttaggc ataatggaaa aaataagagt aaaaaaaaaa
2701 aaaaa
//