LOCUS BC047719 2384 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens transmembrane channel-like 7, mRNA (cDNA clone
MGC:52105 IMAGE:5743899), complete cds.
ACCESSION BC047719
VERSION BC047719.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2384)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2384)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: d Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33636690.
FEATURES Location/Qualifiers
source 1..2384
/db_xref="H-InvDB:HIT000053223"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52105 IMAGE:5743899"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2384
/gene="TMC7"
/gene_synonym="FLJ21240"
/db_xref="GeneID:79905"
/db_xref="HGNC:HGNC:23000"
CDS 62..2233
/gene="TMC7"
/gene_synonym="FLJ21240"
/codon_start=1
/product="transmembrane channel-like 7"
/protein_id="AAH47719.1"
/db_xref="GeneID:79905"
/db_xref="HGNC:HGNC:23000"
/translation="MSESSGSALQPGRPSRQPAVHPENLSLDSSCFSSPPVNFLQELP
SYRSIARRRTTVHSWDKQSGTLLKPTDSYSSQLEDRIAENLSSHSLRNYALNISEKRR
LRDIQETQMKYLSEWDQWKRYSSKSWKRFLEKAREMTTHLELWREDIRSIEGKFGTGI
QSYFSFLRFLVLLNLVIFLIIFMLVLLPVLLTKYKITNSSFVLIPFKDMDKQCTVYPV
SSSGLIYFYSYIIDLLSGTGFLEETSLFYGHYTIDGVKFQNFTYDLPLAYLLSTIASL
ALSLLWIVKRSVEGFKINLIRSEEHFQSYCNKIFAGWDFCITNRSMADLKHSSLRYEL
RADLEEERMRQKIAERTSEETIRIYSLRLFLNCIVLAVLGACFYAIYVATVFSQEHMK
KEIDKMVFGENLFILYLPSIVITLANFITPMIFAKIIRYEDYSPGFEIRLTILRCVFM
RLATICVLVFTLGSKITSCDDDTCDLCGYNQKLYPCWETQVGQEMYKLMIFDFIIILA
VTLFVDFPRKLLVTYCSSCKLIQCWGQQEFAIPDNVLGIVYGQTICWIGAFFSPLLPA
IATLKFIIIFYVKEWSLLYTCRPSPRPFRASNSNFFFLLVLLIGLCLAIIPLTISISR
IPSSKACGPFTNFNTTWEVIPKTVSTFPSSLQSFIHGVTSEAFAVPFFMIICLIMFYF
IALAGAHKRVVIQLREQLSLESRDKCYLIQKLTEAQRDMRN"
BASE COUNT 606 a 593 c 559 g 626 t
ORIGIN
1 gcggcggcgg cggcggctgg agagggtcct cggcagcctc tgaggagcgc ggggcgcggc
61 catgagcgag tccagcggca gtgcgctcca gcccggcagg cccagccggc agccggcggt
121 ccatccagag aacctctctc tagactccag ttgcttctct tctccacctg tgaacttcct
181 ccaagaattg ccaagctacc ggtccattgc acgtaggaga acgactgtcc attcctggga
241 caagcaaagc ggaactttgc taaagccaac cgactcttac agctcccagc tggaggacag
301 aatcgctgaa aacctcagca gccattctct tcgaaattat gcactgaaca tctctgagaa
361 gcggagacta agggacattc aagagacaca aatgaagtat ctctccgaat gggaccagtg
421 gaagcggtat agcagcaagt cttggaagag gttcctagag aaggctcgag agatgacgac
481 ccacctggag ctgtggcggg aggacatccg cagcatagaa gggaaatttg gcactgggat
541 tcagtcctat ttctccttct tgagattcct ggtgttgctg aatttggtga tatttctgat
601 catctttatg ctggttttgc tcccagtctt actcacgaaa tacaagatca ccaacagcag
661 cttcgtgctc attcctttca aagacatgga taaacaatgt acagtctatc cagtaagcag
721 ttctggactc atttactttt acagttatat catagacttg ctttctggca ctggtttcct
781 ggaggaaact agcctctttt acggacatta caccattgat ggggtgaaat ttcagaactt
841 cacctatgat ctgcccctgg cgtatttgtt aagcacaatc gcctccctgg ccctgagcct
901 tctttggata gtgaaaaggt cggtggaagg attcaaaatc aacctgattc ggagtgagga
961 gcactttcag agttactgca acaagatatt tgccggctgg gacttctgca tcactaaccg
1021 cagcatggcg gatctgaagc acagcagctt gcggtacgag ctccgagcag atctggagga
1081 agaaagaatg cggcagaaaa tagcagaaag gacctcagaa gaaacaatac gcatttactc
1141 tttgagactg tttttgaact gtattgttct ggctgtttta ggggcatgct tttatgcaat
1201 atacgtagca actgtcttct cgcaagagca catgaaaaag gaaatcgaca agatggtttt
1261 tggagagaac ctcttcatat tgtatctacc gtctattgtg atcacgctgg ccaattttat
1321 caccccaatg atctttgcca agatcatccg ctatgaggat tattctccag gctttgagat
1381 ccgtctgaca atccttaggt gtgtctttat gcggctggcc accatatgtg tcctggtgtt
1441 cacgctgggc tccaagatca catcctgtga tgatgacaca tgtgaccttt gcggctacaa
1501 ccagaaactc tacccgtgct gggagaccca agttgggcag gaaatgtaca agctgatgat
1561 cttcgacttc atcatcatct tggctgtgac actcttcgtg gattttccta gaaagctcct
1621 ggtgacctac tgttcctctt gcaagctgat tcagtgctgg gggcagcagg agtttgccat
1681 tcctgataac gtcctgggga tagtttacgg gcaaaccatc tgctggatcg gagccttttt
1741 ctcacccctt ctccctgcaa ttgcaaccct gaaattcatt atcatcttct atgtgaaaga
1801 gtggagtctg ctttacacct gcagaccctc ccccaggccg ttcagagcat ccaattctaa
1861 tttcttcttc ctgttggtgt tgttgatcgg gctgtgtttg gcaataatac ctctgacaat
1921 cagcatatca cgcatccctt cctcgaaagc ctgtgggccg ttcaccaact tcaacaccac
1981 ctgggaggtc atccccaaga cagtgagcac cttccccagc tcgctgcagt ccttcatcca
2041 tggtgtcaca tccgaagcct ttgcagttcc tttcttcatg attatttgcc tcatcatgtt
2101 ttacttcatt gccttagctg gagcacacaa acgggtggtc atccagctcc gagagcagct
2161 atccctggaa agtcgtgaca agtgctacct aatccagaaa ctaacagaag cccaaaggga
2221 catgaggaac taactagact gagcgtgaag atggtgctgc ctgttgcttc taagctgacc
2281 tagtgattct gctgagccta cagagtctac ctgggttttg agtggacatt taaaaatata
2341 tttttcttga gtttaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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