LOCUS BC047701 1958 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CKLF-like MARVEL transmembrane domain containing 3,
mRNA (cDNA clone MGC:51956 IMAGE:5770132), complete cds.
ACCESSION BC047701
VERSION BC047701.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1958)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1958)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: h Column: 9.
FEATURES Location/Qualifiers
source 1..1958
/db_xref="H-InvDB:HIT000053211"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51956 IMAGE:5770132"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1958
/gene="CMTM3"
/gene_synonym="BNAS2"
/gene_synonym="FLJ31762"
/gene_synonym="MGC51956"
/db_xref="GeneID:123920"
/db_xref="HGNC:HGNC:19174"
/db_xref="MIM:607886"
CDS 143..691
/gene="CMTM3"
/gene_synonym="BNAS2"
/gene_synonym="FLJ31762"
/gene_synonym="MGC51956"
/codon_start=1
/product="CKLF-like MARVEL transmembrane domain containing
3"
/protein_id="AAH47701.1"
/db_xref="GeneID:123920"
/db_xref="HGNC:HGNC:19174"
/db_xref="MIM:607886"
/translation="MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRL
LLAESGLSFITFICYVASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMD
FLRCVTAALIYFAISITAIAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQ
GDSADETTAHKTEEENSDSDSD"
BASE COUNT 415 a 585 c 509 g 449 t
ORIGIN
1 ggcggggcgt ggcggcgggg gatgcgcccc tgcgcgagcc agtgtcgcct gccctccttc
61 cgcacagccc gggtttccgc ttccctccgg gcgcgagaag aggggagcca ggccgagccc
121 cggccctacc gccgccgccg ccatgtggcc cccagacccc gaccccgacc cggaccccga
181 gcctgccggc ggctcccgtc ccggccccgc ggtccccggg ctccgcgccc tgctgccggc
241 gcgggctttc ctctgctctc tcaaaggccg cctcctgctg gccgagtcgg gtctctcatt
301 catcactttt atctgctatg tggcgtcctc agcatctgcc ttcctcacag cgcctctgct
361 ggagttcctg ctggccttgt acttcctctt tgctgatgcc atgcagctga atgacaagtg
421 gcagggcttg tgctggccca tgatggactt cctgcgctgt gtcaccgcgg ccctcatcta
481 ctttgctatc tccatcacgg ccatcgccaa gtactcggat ggggcttcca aagccgctgg
541 ggtgtttggc ttctttgcta ccatcgtgtt tgcaactgat ttctacctga tctttaacga
601 cgtggccaaa ttcctcaaac aaggggactc tgcagatgag accacagccc acaagacaga
661 agaagagaat tccgactcgg actctgactg aaggcctggc gggtgccttg gcaacctgag
721 ccacacaggc ctccacccct gcgcctcaca ggggtcgctg gcgttggagc ggaggcctgg
781 acttctgagt tgcagagggg gctgcggaca cagcaggccc cctacagcct caggttctgc
841 ctgagcccag cctaccaggc ttgcccctca gctcagcact gttgaccacg ctgcgtatga
901 gggcatcttg ggtatcccac tccttctccc catttctgtc ccacaggcct tcagcccttt
961 aacgtctctg ccaaaaacca gcacaaggag acaaagcaga gccttgtctg tatctgggca
1021 gcaggtgttc catgctgcta ggtggcgggg gtcgggggtc ttctgtttca ctaacaggaa
1081 caaagacaga aaccatgaca gggctgcccc gccaggcccc ggtgggtttg tctgcacttg
1141 gtgctcctgc ccacaccagc cactttggtg acaatgaccc ttccaagaat ctttggttca
1201 aggagcacca gttccctctt cattcttgaa gcagggagaa attgaccttt gccttgtcgc
1261 ccaggaagtg gggctcggca cccataacta acacctccca cccttggaaa ccatgtcttc
1321 tgggggtgag atgaccattc tgggtctaag actgtttcaa agaagagctc atagactgac
1381 tggtccagaa gacagagggt acaacagtgg catcacagtg acagtgtcat ggggagctgg
1441 gcgggcccag ccaaaccctc cttcttccta gagcccagcc agcaggcagg agttcctgga
1501 ccctcaggac agtgaacttc cagacctcag ggcaggtcta tgggccactg caggagatga
1561 gaccagcctt ctgtgttcac ctaacgattt atactgtgta tctgtctttg atggaatttt
1621 gtaacttttt atattttttt atgcaaaagc agcttcttaa cagatggcat tttctgtgac
1681 tctaggcctc acaaaagagc cagagttctg gacccatgtt tggagcattt gtagccttat
1741 tctcttgcgt gtgaatctct taccctgaaa aaaagccata atgaattaag ccagactgac
1801 cacttgcttg gagtgtgtgc ttgaaaaaac cagagcaata ctgttgggta ttgtatcagg
1861 cttcagtaca aactggtaac accaatgtgg atcctgacag ctttcagttt tagcaaaaat
1921 acacgtgaaa tctgaaaaaa aaaaaaaaaa aaaaaaaa
//