LOCUS BC047697 1431 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type,
2, mRNA (cDNA clone MGC:51935 IMAGE:5786518), complete cds.
ACCESSION BC047697
VERSION BC047697.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1431)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1431)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: i Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45359861.
FEATURES Location/Qualifiers
source 1..1431
/db_xref="H-InvDB:HIT000053207"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51935 IMAGE:5786518"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1431
/gene="PSMA2"
/gene_synonym="HC3"
/gene_synonym="MU"
/gene_synonym="PMSA2"
/gene_synonym="PSC2"
/db_xref="GeneID:5683"
/db_xref="HGNC:HGNC:9531"
/db_xref="MIM:176842"
CDS 3..707
/gene="PSMA2"
/gene_synonym="HC3"
/gene_synonym="MU"
/gene_synonym="PMSA2"
/gene_synonym="PSC2"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, alpha
type, 2"
/protein_id="AAH47697.1"
/db_xref="GeneID:5683"
/db_xref="HGNC:HGNC:9531"
/db_xref="MIM:176842"
/translation="MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGV
VLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQ
EPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKA
TAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAGF
RRLTPTEVKDYLAAIA"
BASE COUNT 448 a 246 c 312 g 425 t
ORIGIN
1 agatggcgga gcgcgggtac agcttttcgc tgactacatt cagcccgtct ggtaaacttg
61 tccagattga atatgctttg gctgctgtag ctggaggagc cccgtccgtg ggaattaaag
121 ctgcaaatgg tgtggtatta gcaactgaga aaaaacagaa atccattctg tatgatgagc
181 gaagtgtaca caaagtagaa ccaattacca agcatatagg tttggtgtac agtggcatgg
241 gccccgatta cagagtgctt gtgcacagag ctcgaaaact agctcaacaa tactatcttg
301 tgtaccaaga acccattcct acagctcagc tggtacagag agtagcttct gtgatgcaag
361 aatatactca gtcaggtggt gttcgtccat ttggagtttc tttacttatt tgtggttgga
421 atgagggacg accatattta tttcagtcag atccatctgg agcttacttt gcctggaaag
481 ctacagcaat gggaaagaac tatgtgaatg ggaagacttt ccttgagaaa agatataatg
541 aagatctgga acttgaagat gccattcata cagccatctt aaccctaaag gaaagctttg
601 aagggcaaat gacagaggat aacatagaag ttggaatctg caatgaagct ggatttagga
661 ggcttactcc aactgaagtt aaggattact tggctgccat agcataacaa tgaagtgact
721 gaaaaatcca gaatttcaga taatctatct acttaaacat gtttaaagta tgttttgttt
781 tgcagacttt ttgcatactt atttctacat ggtttaaatc gactgttttt aaaatgacac
841 ttataaatcc taataaactg ttaaacccac cttccagcct tttaggagtt gctaaaattt
901 taacagttat ttcctgcttt ttatcacagt tgatttctga agactacatt gccaagcaga
961 atgatgaaat gactttttcg ttgtcaggca attttggtta agtcaaatct taatgccctc
1021 ttcgctatca gatgttgcct gtgtttccat aaagcaaaat gctgattttg gtaaaaaaca
1081 tgactgcttc tagagctggg aggatctgca gactttcacg gattcatgga acaagaaaag
1141 aagcataggt acttttaggt gccattaggt attgatcagt gaaatcctag ggtgctctat
1201 gagattgtac taggcctatg aagagtggta agccaaatag gtctccatgg gagatacatt
1261 atgtaaataa ataaacaatg gtttgctggt tcctgttggt gtctccacaa gtaggtaaac
1321 atgtttaaag gaacccgggt tcttagattt tgttagactt tttaaactca aggatgagca
1381 taagtgcttg aaataaaatg ctaatactta agtgtcaaaa aaaaaaaaaa a
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