LOCUS BC047678 1519 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens small nuclear ribonucleoprotein 35kDa (U11/U12), mRNA
(cDNA clone MGC:51824 IMAGE:5767646), complete cds.
ACCESSION BC047678
VERSION BC047678.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1519)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1519)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: h Column: 22.
FEATURES Location/Qualifiers
source 1..1519
/db_xref="H-InvDB:HIT000098749"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51824 IMAGE:5767646"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1519
/gene="SNRNP35"
/gene_synonym="HM-1"
/gene_synonym="U1SNRNPBP"
/db_xref="GeneID:11066"
/db_xref="HGNC:HGNC:30852"
CDS 607..1362
/gene="SNRNP35"
/gene_synonym="HM-1"
/gene_synonym="U1SNRNPBP"
/codon_start=1
/product="small nuclear ribonucleoprotein 35kDa (U11/U12)"
/protein_id="AAH47678.1"
/db_xref="GeneID:11066"
/db_xref="HGNC:HGNC:30852"
/translation="MKPANMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARY
VPNKGVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFI
EYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQLRF
GGRDRPFRKPINLPVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGREKRWQE
REPTRVWPDNDWERERDFRDDRIKGREKKERGK"
BASE COUNT 466 a 317 c 439 g 297 t
ORIGIN
1 ccgaggccgg cgcggagaat ctgctgtcgc ctgcagctgc tcgcctgtct ccgtcggaag
61 ggagcccaag ctttgcagag agacagggag tcgcccaggc tggagggcgg tggcgcgatc
121 tcggcccact gcagcgtcga catttcgggt caagcggtcc tccagcctcg gcctctcaaa
181 gtgctggtat tacaggcgtg agccagcgcg tgcctggcca aaaattttct aaatttgtat
241 aataatttat aattgtaatg catttttata gacaccatat gatctaatct tcacaaaaac
301 ctagtgaagt gacatttagc tacatttcac aataagaatc ctgaagctca aaatttactg
361 acctcaaatg atccactttg ggaggctgag gcaggcgggt catctgacat caggagaatc
421 gcttgaacct gggaggcaga ggttgcagtg agccgagatt ggccattgca ctccagcctg
481 ggtgacagag tgagactttg tctcgagtaa aaaaagagaa tgtaaaaatc gaaagagatt
541 gttgtaggaa atctcaacct aatgctgccg gggaggaagt gcacctagaa agattaatga
601 gaaacaatga aaccagctaa catgaacgat tggatgccca tcgccaagga gtatgatcca
661 ctcaaagcgg gcagcattga tggcaccgat gaagacccac acgaccgcgc ggtctggagg
721 gcaatgctgg cacgatatgt ccccaacaaa ggtgtcatag gagatcccct cctcaccctg
781 tttgtggcca gactaaactt gcagaccaag gaggacaaat taaaggaagt cttttcccgc
841 tatggtgaca tccggcggct tcggctggtc agggacttgg tcacaggttt ttcaaagggc
901 tacgccttca tcgaatacaa ggaggagcgt gccgtgatca aagcttaccg agatgctgat
961 ggcctggtta ttgaccagca tgagatattt gtggactacg agctggaaag gactctcaaa
1021 gggtggatcc ctcggcgact tggaggcggt cttgggggaa aaaaggagtc tgggcaactg
1081 agatttgggg gacgggaccg gccttttcga aaacctatta acttgccagt tgttaaaaac
1141 gacctctata gagagggaaa acgggaaagg cgggagcgat ctcgatcccg agaaagacac
1201 tgggactcga ggacaaggga tcgagaccat gacaggggcc gggagaagag atggcaagaa
1261 agagagccga ccagggtgtg gcccgacaat gactgggaga gagagaggga cttcagagat
1321 gacaggatca aggggaggga gaagaaggaa agaggcaagt agaggcccaa cagcagaacc
1381 ccaaagtgaa gttacagtgg aaatgagtgg agggggattg tctttcaacg cagcgtgagt
1441 ctaatggttg aataaaactt actgatgatc atgggaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaa
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