LOCUS BC047676 1483 bp mRNA linear HTC 13-APR-2006
DEFINITION Homo sapiens 2-oxoglutarate and iron-dependent oxygenase domain
containing 2, mRNA (cDNA clone IMAGE:6052131), with apparent
retained intron.
ACCESSION BC047676
VERSION BC047676.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1483)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1483)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: j Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13375845
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1483
/db_xref="H-InvDB:HIT000098748"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6052131"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 289 a 447 c 483 g 264 t
ORIGIN
1 gggaccggaa gcgccaggca gggacccggg gtagatgcta aatccaaact gaaacgtaca
61 gggctggatg attgaagcac cagcgggaac tagtcggacc tccgagctct ttaaactgtc
121 ctcagctcgg ctggttctcc acgagctccg ggcagacggc ggggggtggg tcggcgttta
181 agtcaaaggc cttggggctc cgagtccctt cctctccccg tcctgtgaag gcacgaccca
241 gttcagctgt ctgtaaagtg gagccattag tccctgcctc gtagtgggaa aactgggagg
301 cggaacgagg aggccgccgg tcccaacccg gcccaggagc atctttctcc gcagaccgtt
361 tcctggcgag atcctgcgca gccgaggctg tgttagcgcc aaggacttcc agcagctgtt
421 agcagagctt gagcaggagg tggagcggcg gcagcggctg gggcaggagt cagcagctag
481 gaaagccctc atcgcgagtt cctaccaccc ggcacggcct gaggtctacg actcactgca
541 ggatgcagct ctggcccccg agttcctggc cgtgactgag tacagcgtgt ccccagacgc
601 agacctcaag ggccttctcc agcggctgga gacagtatcg ggtgatgaaa caggaagact
661 gaagcccagg cctggccggc ccacggccac attcaggcca acagaccatc cctccttcca
721 cagaggagaa gcgcatctac cgggtgcctg ttttcacagc gcccttctgc caggccctgc
781 tggaagagct ggagcacttc gagcaatcgg acatgcctaa ggggaggccc aacaccatga
841 acaactacgg ggtgctgctg cacgagctcg ggctggacga gccgctgatg acaccactgc
901 gggagcgctt cctgcagccg ctgatggccc tgctgtaccc tgactgtggc gggggccggc
961 tcgacagcca ccgggccttt gtggtcaaat acgcaccggg ccaggacctg gagctgggct
1021 gccactatga taatgccgag ctcaccctca atgtggcctt gggcaaggtc ttcacagggg
1081 gcgccctgta ttttgggggc ctcttccagg cacccacagc cctgacggag cccctggagg
1141 tggagcacgt ggtgggccag ggtgtcctcc accgtggcgg ccagctgcat ggagcccggc
1201 ccttgggcac tggtgagcgt tggaaccttg tcgtctggct ccgagcctct gctgtgcgca
1261 acagcctctg tcccatgtgc tgccgtgagc ccgacctggt ggacgatgag ggcttcggtg
1321 atggcttcac ccgagaggag cccgccacgg tggatgtatg tgcgctcacc tgagcttgct
1381 tgggcccagt gtgggggtgg caggcaggtg agggctccgt tgccttggtc tgggggcaga
1441 aataaaatcc ccgcagccta ctgcaaaaaa aaaaaaaaaa aaa
//