LOCUS BC047672 1516 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens embryonic ectoderm development, mRNA (cDNA clone
IMAGE:5582465), partial cds.
ACCESSION BC047672
VERSION BC047672.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1516)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1516)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC047672.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: a Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24041019.
FEATURES Location/Qualifiers
source 1..1516
/db_xref="H-InvDB:HIT000053193"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5582465"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1516
/gene="EED"
/gene_synonym="HEED"
/gene_synonym="WAIT1"
/db_xref="GeneID:8726"
/db_xref="MIM:605984"
CDS <1..1285
/gene="EED"
/gene_synonym="HEED"
/gene_synonym="WAIT1"
/codon_start=2
/product="EED protein"
/protein_id="AAH47672.1"
/db_xref="GeneID:8726"
/db_xref="MIM:605984"
/translation="MPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTN
TPNAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATV
GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRI
INPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGV
EGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFI
SQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSES
NVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTH
HKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR"
misc_feature 212..1276
/gene="EED"
/gene_synonym="HEED"
/gene_synonym="WAIT1"
/note="COG2319; Region: FOG: WD40 repeat [General function
prediction only]"
/db_xref="CDD:COG2319"
BASE COUNT 491 a 246 c 332 g 447 t
ORIGIN
1 catgcctgcg gccaagaagc agaagctgag cagtgacgag aacagcaatc cagacctctc
61 tggagacgag aatgatgacg ctgtcagtat agaaagtggt acaaacactg aacgccctga
121 tacacctaca aacacgccaa atgcacctgg aaggaaaagt tggggaaagg gaaaatggaa
181 gtcaaagaaa tgcaaatatt ctttcaaatg tgtaaatagt ctcaaggaag atcataacca
241 accattgttt ggagttcagt ttaactggca cagtaaagaa ggagatccat tagtgtttgc
301 aactgtagga agcaacagag ttaccttgta tgaatgtcat tcacaaggag aaatccggtt
361 gttgcaatct tacgtggatg ctgatgctga tgaaaacttt tacacttgtg catggaccta
421 tgatagcaat acgagccatc ctctgctggc tgtagctgga tctagaggca taattaggat
481 aataaatcct ataacaatgc agtgtataaa gcactatgtt ggccatggaa atgctatcaa
541 tgagctgaaa ttccatccaa gagatccaaa tcttctcttg tcagtaagta aagatcatgc
601 tttacgatta tggaatatcc agacggacac tctggtggca atatttggag gcgtagaagg
661 gcacagagat gaagttctaa gtgctgatta tgatcttttg ggtgaaaaaa taatgtcctg
721 tggtatggat cattctctta aactttggag gatcaattca aagagaatga tgaatgcaat
781 taaggaatct tatgattata atccaaataa aactaacagg ccatttattt ctcagaaaat
841 ccattttcct gatttttcta ccagagacat acataggaat tatgttgatt gtgtgcgatg
901 gttaggcgat ttgatacttt ctaagtcttg tgaaaatgcc attgtgtgct ggaaacctgg
961 caagatggaa gatgatatag ataaaattaa acccagtgaa tctaatgtga ctattcttgg
1021 gcgatttgat tacagccagt gtgacatttg gtacatgagg ttttctatgg atttctggca
1081 aaagatgctt gcattgggca atcaagttgg caaactttat gtttgggatt tagaagtaga
1141 agatcctcat aaagccaaat gtacaacact gactcatcat aaatgtggtg ctgctattcg
1201 acaaaccagt tttagcaggg atagcagcat tcttatagct gtttgtgatg atgccagtat
1261 ttggcgctgg gatcgacttc gataaaatac ttttgcctaa tcaaaattag agtgtgtttg
1321 ttgtctgtgt aaaatagaat taatgtatct tgctagtaag ggcacgtaga gcatttagag
1381 ttgtctttca gcattcaatc aggctgagct gaatgtagtg atgtttacat tgtttacatt
1441 ctttgtactg tcttcctgct cagactctac tgcttttaat aaaaatttat ttttgtaaaa
1501 aaaaaaaaaa aaaaaa
//