LOCUS BC047635 2606 bp mRNA linear HUM 11-AUG-2005
DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member
12, mRNA (cDNA clone MGC:51099 IMAGE:4820920), complete cds.
ACCESSION BC047635
VERSION BC047635.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2606)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2606)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: f Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749432.
FEATURES Location/Qualifiers
source 1..2606
/db_xref="H-InvDB:HIT000098717"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51099 IMAGE:4820920"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2606
/gene="SLC39A12"
/gene_synonym="bA570F3.1"
/gene_synonym="FLJ30499"
/db_xref="GeneID:221074"
CDS 189..1403
/gene="SLC39A12"
/gene_synonym="bA570F3.1"
/gene_synonym="FLJ30499"
/codon_start=1
/product="SLC39A12 protein"
/protein_id="AAH47635.1"
/db_xref="GeneID:221074"
/translation="MCFRTKLSVSWVPLFLLLSRVFSTETDKPSAQDSRSRGSSGQPA
DLLQVLSAGDHPPHNHSRSLIKTLLEKTGCPRRRNGMQGDCNLCFEPDALLLIAGGNF
EDQLREEVVQRVSLLLLYYIIHQEEICSSKLNMSNKEYKFYLHSLLSLRQDEDSSFLS
QNETEDILAFTRQYFDTSQSQCMETKTLQKKSGIVSSEGANESTLPQLAAMIITLSLQ
GVCLGQGNLPSPDYFTEYIFSSLNRTNTLRLSELDQLLNTLWTRSTCIKNEKIHQFQR
KQNNIITHDQDYSNFSSSMEKESEDGPISWDQTCFSARQRVEIFLQKGLSLISKEDFK
QMSPGIIQRWSFSIAVRRTTGLSYSCLWAWPSGHCLGTLCSTLSLRFLVYISRKPQNL
GISMKAKVIFGN"
BASE COUNT 776 a 542 c 516 g 772 t
ORIGIN
1 aatgaatttt aaaaacaggg aactttgtaa ctgtgaaata ctctccagga tttaaaaggc
61 tgtggagctc cagataaaga atcgtttatc tttcttctga agaaattcct ttggttacaa
121 gtttacccca taaacggcaa cacactcacc tccatccaag acagactcaa ggtggaggaa
181 gcgtggaaat gtgcttccgg acaaagctct cagtatcctg ggtgccattg tttcttctac
241 tcagccgtgt tttttctact gagacagaca aaccctcagc ccaggacagc agaagccgtg
301 ggagttcagg ccaaccggca gacctgctac aggttctctc tgctggtgac cacccacccc
361 acaaccactc aagaagcctc atcaaaacat tgttggagaa aactgggtgc ccacggagga
421 gaaacggaat gcaaggagat tgcaatctgt gctttgaacc agatgcacta ttactaatag
481 ctggaggaaa ttttgaagat cagcttagag aagaagtggt ccagagagtt tctcttctcc
541 ttctctatta cattattcat caggaagaga tctgttcttc aaagctcaac atgagtaata
601 aagagtataa attttaccta cacagcctac tgagcctcag gcaggatgaa gattcctctt
661 tcctttcaca gaatgagaca gaagatatct tggctttcac caggcagtac tttgacactt
721 ctcaaagcca gtgtatggaa accaaaacgc tgcagaaaaa atctggaata gtgagcagtg
781 aaggtgctaa tgaaagtacg cttcctcagt tggcagccat gatcattact ttgtccctcc
841 agggtgtttg tctgggacaa ggaaacttgc cttcaccaga ctactttaca gaatatattt
901 tcagttcctt gaatcgtacg aatacactcc gcctatcaga actagaccaa ctcctcaaca
961 ctctctggac cagaagtact tgtatcaaaa atgagaaaat ccatcaattt caaaggaaac
1021 aaaacaacat aataacccat gatcaggact attctaattt ctcttcatcc atggaaaaag
1081 agtctgagga tggtccaatt tcctgggatc agacctgctt ctctgctagg cagcgtgtgg
1141 agatatttct acagaagggc ctctcactca tttctaagga ggactttaag caaatgagtc
1201 cagggatcat ccagcgctgg tccttttcca tagctgtgag gagaactaca ggcttatctt
1261 acagctgttt gtgggcttgg ccgtcgggac actgtctggg gacgctctgc tccaccttat
1321 ccctcaggtt cttggtttac ataagcagga agccccagaa tttgggcatt tccatgaaag
1381 caaaggtcat atttggaaac tgatgggatt aattggaggc atccatggat ttttcttgat
1441 agaaaaatgt tttattcttc ttgtatcacc aaatgacaag cagggcctgt cattggttaa
1501 tgggcacgtg ggtcattccc accatcttgc actcaactct gaattaagtg accaggcagg
1561 cagaggcaaa tctgcttcaa ctatccagtt gaaaagccca gaagattcac aggcagctga
1621 aatgcctata ggcagtatga cagcctccaa cagaaaatgt aaagccatta gcttgttagc
1681 aatcatgatt ctggttgggg acagcctgca taattttgca gatggcctag ccataggagc
1741 agccttctca tcatcatccg agtcaggagt gaccactacg attgctatct tgtgtcatga
1801 aatcccacat gaaatgggag actttgccgt gctcttaagc tctggacttt ctatgaagac
1861 tgccatcctg atgaatttta taagctccct aactgccttc atgggattat acattggcct
1921 ttccgtgtca gctgatccat gtgttcaaga ctggatcttc acagtcactg ctgggatgtt
1981 cttatattta tccttggttg aaatgcttcc tgaaatgact catgttcaaa cacaacgacc
2041 ctggatgatg tttctcctgc aaaactttgg attgatccta ggttggcttt ctctgctgct
2101 cttggctata tatgagcaaa atattaaaat ataagtgagg atcttcaaca tctttcaaaa
2161 atgcatttat atagtcttac tttgtttctt tcattgcact ctataatgat ttttaaatta
2221 agaatttttt atcttaggca aagtgtgtct ctttcaattc attaacttat taattttata
2281 atgcagtttt atttttggaa acatataaat atcagactgt ccttaattga aattttgtct
2341 ttggtttcca acaccatgat gaagctcttg ctttttaaaa agtagttagt aaattctgca
2401 tgaattttag taaactttaa aaaatagatt ttttccctaa gaaagaatgt ttgtagaatt
2461 taaagtggac agatgcctgt tggggtaaaa tcaactgcaa ctttttgatg ttaatttttt
2521 tccctgtgca attataaact ataagcaagt taagtgacaa gcaaatgtaa taaagactag
2581 ttttaatatg aaaaaaaaaa aaaaaa
//