LOCUS BC047619 2355 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens protein phosphatase 2C, magnesium-dependent, catalytic
subunit, mRNA (cDNA clone MGC:50991 IMAGE:4824168), complete cds.
ACCESSION BC047619
VERSION BC047619.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2355)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2355)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45439338.
FEATURES Location/Qualifiers
source 1..2355
/db_xref="H-InvDB:HIT000098702"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50991 IMAGE:4824168"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2355
/gene="PPM2C"
/gene_synonym="PDH"
/gene_synonym="PDP"
/gene_synonym="PDP1"
/db_xref="GeneID:54704"
/db_xref="HGNC:HGNC:9279"
/db_xref="MIM:605993"
CDS 191..1804
/gene="PPM2C"
/gene_synonym="PDH"
/gene_synonym="PDP"
/gene_synonym="PDP1"
/codon_start=1
/product="protein phosphatase 2C, magnesium-dependent,
catalytic subunit"
/protein_id="AAH47619.1"
/db_xref="GeneID:54704"
/db_xref="HGNC:HGNC:9279"
/db_xref="MIM:605993"
/translation="MPAPTQLFFPLIRNCELSRIYGTACYCHHKHLCCSSSYIPQSRL
RYTPHPAYATFCRPKENWWQYTQGRRYASTPQKFYLTPPQVNSILKANEYSFKVPEFD
GKNVSSILGFDSNQLPANAPIEDRRSAATCLQTRGMLLGVFDGHAGCACSQAVSERLF
YYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFSKEASKLYFNSLRTYWQE
LIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACV
AHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELERLKLEHPKSEA
KSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTP
PYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGG
YKVTLGQMHGLLTERRTKMSSVFEDQNAATHLIRHAVGNNEFGTVDHERLSKMLSLPE
ELARMYRDDITIIVVQFNSHVVGAYQNQE"
BASE COUNT 645 a 521 c 558 g 631 t
ORIGIN
1 acggtagggg agcagagtgg gcaggccggg ggtgagggct cgcgctccgg gagctgcacg
61 gggctgcgtg gaaagagcgc cgagcggtgg cgtcgttgtc gccccctcct cgtcgggaag
121 aatcgtttgg tctcctgccg tgcccggaat cccagtcaga agttccagcc tgccactgtt
181 ctctgatgcc atgccagcac caactcaact gttttttcct ctcatccgta actgtgaact
241 gagcaggatc tatggcactg catgttactg ccaccacaaa catctctgtt gttcctcatc
301 gtacattcct cagagtcgac tgagatacac acctcatcca gcatatgcta ccttttgcag
361 gccaaaggag aactggtggc agtacaccca aggaaggaga tatgcttcca caccacagaa
421 attttacctc acacctccac aagtcaatag catccttaaa gctaatgaat acagtttcaa
481 agtgccagaa tttgacggca aaaatgtcag ttctatcctt ggatttgaca gcaatcagct
541 gcctgcaaat gcacccattg aggaccggag aagtgcagca acctgcttgc agaccagagg
601 gatgcttttg ggggtttttg atggccatgc aggttgtgct tgttcccagg cagtcagtga
661 aagactcttt tattatattg ctgtctcttt gttaccccat gagactttgc tagagattga
721 aaatgcagtg gagagcggcc gggcactgct acccattctc cagtggcaca agcaccccaa
781 tgattacttt agtaaggagg catccaaatt gtactttaac agcttgagga cttactggca
841 agagcttata gacctcaaca ctggtgagtc gactgatatt gatgttaagg aggctctaat
901 taatgccttc aagaggcttg ataatgacat ctccttggag gcgcaagttg gtgatcctaa
961 ttcttttctc aactacctgg tgcttcgagt ggcattttct ggagccactg cttgtgtggc
1021 ccatgtggat ggtgttgacc ttcatgtggc caatactggc gatagcagag ccatgctggg
1081 tgtgcaggaa gaggacggct catggtcagc agtcacgctg tctaatgacc acaatgctca
1141 aaatgaaaga gaactagaac ggctgaaatt ggaacatcca aagagtgagg ccaagagtgt
1201 cgtgaaacag gatcggctgc ttggcttgct gatgccattt agggcatttg gagatgtaaa
1261 gttcaaatgg agcattgacc ttcaaaagag agtgatagaa tctggcccag accagttgaa
1321 tgacaatgaa tataccaagt ttattcctcc taattatcac acacctcctt atctcactgc
1381 tgagccagag gtaacttacc accgattaag gccacaggat aagtttctgg tgttggctac
1441 tgatgggttg tgggagacta tgcataggca ggatgtggtt aggattgtgg gtgagtacct
1501 aactggcatg catcaccaac agccaatagc tgttggtggc tacaaggtga ctctgggaca
1561 gatgcatggc cttttaacag aaaggagaac caaaatgtcc tcggtatttg aggatcagaa
1621 cgcagcaacc catctcattc gccacgctgt gggcaacaac gagtttggga ctgttgatca
1681 tgagcgcctc tctaaaatgc ttagtcttcc tgaagagctt gctcgaatgt acagagatga
1741 cattacaatc attgtagttc agttcaattc tcatgttgta ggggcgtatc aaaaccaaga
1801 atagtgagtg gctctttcac tggcaattct caaatgatat acatttaaag ggcagatttt
1861 ttaaaaagat actactataa taaacatttc cagttggtca ttctaagcat ttaccctttt
1921 gatactctag ctagtcaggt actccaaatt gactttgcag cagggtggca gggtcaggag
1981 agtctggtcc tgcctagctc agatttcatg gcacctgcac ttgaagcaag tcacttcttt
2041 atcacaggtg tcttgaaaca ttagcttctt ttaccaacct gagaaaatta ggatgacctg
2101 gcaaataaga tcttgaatag gccaaaagca agtatcttgc tgtgtgtagt ctcttggtta
2161 aagtgaagaa acagtactgt tcacaccttt cttcactgag attccagtgt acatgagaac
2221 atatatttat tgcatgattt tctagataca cagtctatgc attattcata tacatttatt
2281 ttagcctaaa gtggttttca aatccagttc ttcaagccat aaatgaccaa gatccaagca
2341 aaaaaaaaaa aaaaa
//