LOCUS       BC047618                3241 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens beta-1,3-N-acetylgalactosaminyltransferase 1
            (globoside blood group), mRNA (cDNA clone MGC:50980 IMAGE:5259171),
            complete cds.
ACCESSION   BC047618
VERSION     BC047618.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3241)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3241)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 90 Row: l Column: 4
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 15451878.
FEATURES             Location/Qualifiers
     source          1..3241
                     /db_xref="H-InvDB:HIT000053184"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:50980 IMAGE:5259171"
                     /tissue_type="Brain, hippocampus"
                     /clone_lib="NIH_MGC_95"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..3241
                     /gene="B3GALNT1"
                     /gene_synonym="beta3Gal-T3"
                     /gene_synonym="galT3"
                     /gene_synonym="Gb4Cer"
                     /gene_synonym="GLCT3"
                     /gene_synonym="GLOB"
                     /gene_synonym="P"
                     /gene_synonym="P1"
                     /db_xref="GeneID:8706"
                     /db_xref="HGNC:HGNC:918"
                     /db_xref="MIM:603094"
     CDS             342..1337
                     /gene="B3GALNT1"
                     /gene_synonym="beta3Gal-T3"
                     /gene_synonym="galT3"
                     /gene_synonym="Gb4Cer"
                     /gene_synonym="GLCT3"
                     /gene_synonym="GLOB"
                     /gene_synonym="P"
                     /gene_synonym="P1"
                     /codon_start=1
                     /product="beta-1,3-N-acetylgalactosaminyltransferase 1
                     (globoside blood group)"
                     /protein_id="AAH47618.1"
                     /db_xref="GeneID:8706"
                     /db_xref="HGNC:HGNC:918"
                     /db_xref="MIM:603094"
                     /translation="MASALWTVLPSRMSLRSLKWSLLLLSLLSFFVMWYLSLPHYNVI
                     ERVNWMYFYEYEPIYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWG
                     EKKSWWGYEVLTFFLLGQEAEKEDKMLALSLEDEHLLYGDIIRQDFLDTYNNLTLKTI
                     MAFRWVTEFCPNAKYVMKTDTDVFINTGNLVKYLLNLNHSEKFFTGYPLIDNYSYRGF
                     YQKTHISYQEYPFKVFPPYCSGLGYIMSRDLVPRIYEMMGHVKPIKFEDVYVGICLNL
                     LKVNIHIPEDTNLFFLYRIHLDVCQLRRVIAAHGFSSKEIITFWQVMLRNTTCHY"
BASE COUNT          996 a          553 c          641 g         1051 t
ORIGIN      
        1 gcttccgagc tgggtgcgcg ccgagcacag gagattgcct gcgtttagga ggtggctgcg
       61 ttgtgggaaa agctatcaag gaagaaattg ccaaaccatg tctttttttc tgttttcaga
      121 gtagttcaca acagatctga gtgttttaat taagcatgga atacagaaaa caacaaaaaa
      181 cttaagcttt aatttcatct ggaattccac agttttctta gctccctgga cccggttgac
      241 ctgttggctc ttcccgctgg ctgctctatc acgtggtgct ctccgactac tcaccccgag
      301 tgtaaagaac cttcggctcg cgtgcttctg agctgctgtg gatggcctcg gctctctgga
      361 ctgtccttcc gagtaggatg tcactgagat ccctcaaatg gagcctcctg ctgctgtcac
      421 tcctgagttt ctttgtgatg tggtacctca gccttcccca ctacaatgtg atagaacgcg
      481 tgaactggat gtacttctat gagtatgagc cgatttacag acaagacttt cacttcacac
      541 ttcgagagca ttcaaactgc tctcatcaaa atccatttct ggtcattctg gtgacctccc
      601 acccttcaga tgtgaaagcc aggcaggcca ttagagttac ttggggtgaa aaaaagtctt
      661 ggtggggata tgaggttctt acatttttct tattaggcca agaggctgaa aaggaagaca
      721 aaatgttggc attgtcctta gaggatgaac accttcttta tggtgacata atccgacaag
      781 attttttaga cacatataat aacctgacct tgaaaaccat tatggcattc aggtgggtaa
      841 ctgagttttg ccccaatgcc aagtacgtaa tgaagacaga cactgatgtt ttcatcaata
      901 ctggcaattt agtgaagtat cttttaaacc taaaccactc agagaagttt ttcacaggtt
      961 atcctctaat tgataattat tcctatagag gattttacca aaaaacccat atttcttacc
     1021 aggagtatcc tttcaaggtg ttccctccat actgcagtgg gttgggttat ataatgtcca
     1081 gagatttggt gccaaggatc tatgaaatga tgggtcacgt aaaacccatc aagtttgaag
     1141 atgtttatgt cgggatctgt ttgaatttat taaaagtgaa cattcatatt ccagaagaca
     1201 caaatctttt ctttctatat agaatccatt tggatgtctg tcaactgaga cgtgtgattg
     1261 cagcccatgg cttttcttcc aaggagatca tcactttttg gcaggtcatg ctaaggaaca
     1321 ccacatgcca ttattaactt cacattctac aaaaagccta gaaggacagg atactttgtg
     1381 gaaagtgtta aataaagtag gtactgtgga aaattcatgg ggaggtcagt gtgctggctt
     1441 acactgaact gaaactcatg aaaaacccag actggagact ggagggttac acttgtgatt
     1501 tattagtcag gcccttcaaa gatgatatgt ggaggaatta aatataaagg aattggaggt
     1561 ttttgctaaa gaaattaata ggaccaaaca atttggacat gtcattctgt agactagaat
     1621 ttcttaaaaa ggtgttactg agttataagc tcactaggct gtaaaaacaa aacaatgtag
     1681 agttttattt attgaacaat gtagtcactt gaaggttttg tgtatatctt atgtggatta
     1741 ccaatttaaa aatatatgta gttctgtgtc aaaaaacttc ttcactgaag ttatactgaa
     1801 caaaatttta cctgtttttg gtcatttata aagtacttca agatgttgca gtatttcaca
     1861 gttattatta tttaaaatta cttcaacttt gtgtttttaa atgttttgac gatttcaata
     1921 caagataaaa aggatagtga atcattcttt acatgcaaac attttccagt tacttaactg
     1981 atcagtttat tattgataca tcactccatt aatgtaaagt cataggtcat tattgcatat
     2041 cagtaatctc ttggactttg ttaaatattt tactgtggta atatagagaa gaattaaagc
     2101 aagaaaatct gaagtattgt cttgttttta aaaaatacag ttcctagtgt ttttagaagt
     2161 cacttaattt gtctcatttt tccacctgga aattaggaat aatgtagaat gcaaggcagt
     2221 aatttcgttt tggaaaggac tctgaaggca gaaaagaagg gagagaacct catgggcaga
     2281 atattataaa aagagtgtca tattccagca tttgaattgg aaagagaaga gtgaagatcc
     2341 aagttgcatt attaatctgc cctgtgtttt ttccttttaa caatcagttt gagctgctgc
     2401 tgttatgagt ttctcatcaa gatgaaagcc ctaatatgta aagtcaaatc cgatttaaat
     2461 tttgtgcttt tatagaaaga aatttcttca tagacgtggt gatatatcat ttgttggacc
     2521 tgctaatagt aggtcaaagg ggagcactcc ttgccccctg ttcctgggtt tatgcagttt
     2581 tctttttaga gtttatatag ggcaagtggt tctttttctc tgaattacag gatggaaaaa
     2641 ggtcatatcc tttgtcagga aatataaact tgaaagtatg tagtcagctc ttgtaatact
     2701 catatttatg attgtcctat atgaaaaaca acttcagtta aaactataat gtgtgattct
     2761 gtataacaag gtgatgtctg tttcccaggg ctcagaccta atccagttat aataaaatca
     2821 attaaatgaa atattctata gaatcgatct atgcccttgt taatctccat ccatatagga
     2881 gtcacgttct ttaagacaga tggtggtagt tatttttgtg gcatggttag atttgactgg
     2941 ttttgcagaa gattacagtt atgtactgca taatgacata tacaatagtg gtcccataaa
     3001 attataatgg agcagaaaat ctattgcctc atgatgtttt agccgtttta atgtcatagc
     3061 ctagtgcatt actcacgtgt ctgtggagat gctggtgtaa acaaacctac tacactgcca
     3121 gttgtataaa agtacagcac attcagttat gtacagtatg taatactgat aatgacaata
     3181 aatgacaccg gtttgtgtat ttacttttta taaaaaaaaa aaaagaaaaa aaaaaaaaaa
     3241 a
//