LOCUS BC047595 3024 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens adhesion molecule with Ig-like domain 2, mRNA (cDNA clone MGC:48648 IMAGE:4828334), complete cds. ACCESSION BC047595 VERSION BC047595.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3024) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3024) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 90 Row: i Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40556374. FEATURES Location/Qualifiers source 1..3024 /db_xref="H-InvDB:HIT000053181" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:48648 IMAGE:4828334" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3024 /gene="AMIGO2" /gene_synonym="ALI1" /gene_synonym="DEGA" /db_xref="GeneID:347902" /db_xref="HGNC:HGNC:24073" CDS 469..2037 /gene="AMIGO2" /gene_synonym="ALI1" /gene_synonym="DEGA" /codon_start=1 /product="adhesion molecule with Ig-like domain 2" /protein_id="AAH47595.1" /db_xref="GeneID:347902" /db_xref="HGNC:HGNC:24073" /translation="MSLRVHTLPTLLGAVVRPGCRELLCLLMITVTVGPGASGVCPTA CICATDIVSCTNKNLSKVPGNLFRLIKRLDLSYNRIGLLDSEWIPVSFAKLNTLILRH NNITSISTGSFSTTPNLKCLDLSSNKLKTVKNAVFQELKVLEVLLLYNNHISYLDPSA FGGLSQLQKLYLSGNFLTQFPMDLYVGRFKLAELMFLDVSYNRIPSMPMHHINLVPGK QLRGIYLHGNPFVCDCSLYSLLVFWYRRHFSSVMDFKNDYTCRLWSDSRHSRQVLLLQ DSFMNCSDSIINGSFRALGFIHEAQVGERLMVHCDSKTGNANTDFIWVGPDNRLLEPD KEMENFYVFHNGSLVIESPRFEDAGVYSCIAMNKQRLLNETVDVTINVSNFTVSRSHA HEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKTKRQKNMLHQSNAHSSILSPGPA SDASADERKAGAGKRVVFLEPLKDTAAGQNGKVRLFPSEAVIAEGILKSTRGKSDSDS VNSVFSDTPFVAST" BASE COUNT 819 a 656 c 708 g 841 t ORIGIN 1 ggggtcctgc agcctcccga gtgcggagag gcggggccgc ccgctgccgc ccggctgcct 61 gcgccccctc ccgcggcccc ggctctggga gcggggcgcc ccgcgcgcgg gcacacggcg 121 gccagagcgc cgaggcggta ccttcagcct gcaatgagag gaacccggga gagcccccgg 181 gagccagcga agagcttggc tgctgcgtcc agggctgctg ctgccgccgc ggctgcttga 241 aactcctcaa agttgagagc cggctagagg gtgccgcccg ccgggagccg gagggaaagg 301 aagtcgggag gtgcaagagt gacagacacg gacagacgga cgcgcagacc ttcggaaggc 361 actgcgtagg cagcctcccc ggagcccacg aggctcccca gcaccgttca ctggtgggag 421 gctgagccgg tggaaaagac accgggaaga gactcagagg cgaccataat gtcgttacgt 481 gtacacactc tgcccaccct gcttggagcc gtcgtcagac cgggctgcag ggagctgctg 541 tgtttgctga tgatcacagt gactgtgggc cctggtgcct ctggggtgtg ccccaccgct 601 tgcatctgtg ccactgacat cgtcagctgc accaacaaaa acctgtccaa ggtgcctggg 661 aaccttttca gactgattaa gagactggac ctgagttata acagaattgg gcttctggat 721 tctgagtgga ttccagtatc gtttgcaaag ctgaacaccc taattcttcg tcataacaac 781 atcaccagca tttccacggg cagtttttcc acaactccaa atttgaagtg tcttgactta 841 tcgtccaata agctgaagac ggtgaaaaat gctgtattcc aagagttgaa ggttctggaa 901 gtgcttctgc tttacaacaa tcacatatcc tatctcgatc cttcagcgtt tggagggctc 961 tcccagttgc agaaactcta cttaagtgga aattttctca cacagtttcc gatggatttg 1021 tatgttggaa ggttcaagct ggcagaactg atgtttttag atgtttctta taaccgaatt 1081 ccttccatgc caatgcacca cataaattta gtgccaggaa aacagctgag aggcatctac 1141 cttcatggaa acccatttgt ctgtgactgt tccctgtact ccttgctggt cttttggtat 1201 cgtaggcact ttagctcagt gatggatttt aagaacgatt acacctgtcg cctgtggtct 1261 gactccaggc actcgcgtca ggtacttctg ctccaggata gctttatgaa ttgctctgac 1321 agcatcatca atggttcctt tcgtgcgctt ggctttattc atgaggctca ggtcggggaa 1381 agactgatgg tccactgtga cagcaagaca ggtaatgcaa atacggattt catctgggtg 1441 ggtccagata acagactgct agagccggat aaagagatgg aaaactttta cgtgtttcac 1501 aatggaagtc tggttataga aagccctcgt tttgaggatg ctggagtgta ttcttgtatc 1561 gcaatgaata agcaacgcct gttaaatgaa actgtggacg tcacaataaa tgtgagcaat 1621 ttcactgtaa gcagatccca tgctcatgag gcatttaaca cagcttttac cactcttgct 1681 gcttgcgtgg ccagtatcgt tttggtactt ttgtacctct atctgactcc atgcccctgc 1741 aagtgtaaaa ccaagagaca gaaaaatatg ctacaccaaa gcaatgccca ttcatcgatt 1801 ctcagtcctg gccctgctag tgatgcctcc gctgatgaac ggaaggcagg tgcaggtaaa 1861 agagtggtgt ttttggaacc cctgaaggat actgcagcag ggcagaacgg gaaagtcagg 1921 ctctttccca gcgaggcagt gatagctgag ggcatcctaa agtccacgag ggggaaatct 1981 gactcagatt cagtcaattc agtgttttct gacacacctt ttgtggcgtc cacttaattt 2041 gtgcctatat ttgtatgatg tcataattta atctgttcat atttaacttt gtgtgtggtc 2101 tgcaaaataa acagcaggac agaaattgtg ttgttttgtt ctttgaaata caaccaaatt 2161 ctcttaaaat gattggtagg aaatgaggta aagtacttca gttcctcaat gtgccagaga 2221 aagatggggt tgttttccaa agtttaagtt ctagatcaca atatcttagc ttttagcact 2281 attggtaatt tcagagtagg cccaaaggtg atatgactcc cattgtccct ttatttagga 2341 tattgaaaga aaaaataaac tttatgtatt agtgtccttt aaaaatagac tttgctaact 2401 tactagtacc agagttattt taaagaaaaa cactagtgtc caatttcatt tttaaaagat 2461 gtagaaagaa gaatcaagca tcaattaatt ataaagccta aagcaaagtt agatttgggg 2521 gttattcagc caaaattacc gttttagacc agaatgaata gactacactg ataaaatgta 2581 ctggataatg ccacatccta tatggtgtta tagaaatagt gcaaggaaag tacatttgtt 2641 tgcctgtctt ttcattttgt acattcttcc cattctgtat tcttgtacaa aagatctcat 2701 tgaaaattta aagtcatcat aatttgttgc cataaatatg taagtgtcaa taccaaaatg 2761 tctgagtaac ttcttaaatc cctgttctag caaactaata ttggttcatg tgcttgtgta 2821 tatgtaaatc ttaaattatg tgaactatta aatagaccct actgtactgt gctttggaca 2881 tttgaattaa tgtaaatata tgtaatctgt gacttgatat tttgttttat ttggctattt 2941 aaaaacataa atctaaaatg tcttatgtta tcagattatg ctattttgta taaagcacca 3001 ctgatagcaa aaaaaaaaaa aaaa //