LOCUS BC047570 3075 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens zinc finger protein 227, mRNA (cDNA clone MGC:48349
IMAGE:4838846), complete cds.
ACCESSION BC047570
VERSION BC047570.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3075)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3075)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: l Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32698785.
FEATURES Location/Qualifiers
source 1..3075
/db_xref="H-InvDB:HIT000053171"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48349 IMAGE:4838846"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3075
/gene="ZNF227"
/db_xref="GeneID:7770"
/db_xref="HGNC:HGNC:13020"
CDS 206..2605
/gene="ZNF227"
/codon_start=1
/product="zinc finger protein 227"
/protein_id="AAH47570.1"
/db_xref="GeneID:7770"
/db_xref="HGNC:HGNC:13020"
/translation="MPSQNYDLPQKKQEKMTKFQEAVTFKDVAVVFSREELRLLDLTQ
RKLYRDVMVENFKNLVAVGHLPFQPDMVSQLEAEEKLWMMETETQRSSKHQNKMETLQ
KFALKYLSNQELSCWQIWKQVASELTRCLQGKSSQLLQGDSIQVSENENNIMNPKGDS
SIYIENQEFPFWRTQHSCGNTYLSESQIQSRGKQIDVKNNLQIHEDFMKKSPFHEHIK
TDTEPKPCKGNEYGKIISDGSNQKLPLGEKPHPCGECGRGFSYSPRLPLHPNVHTGEK
CFSQSSHLRTHQRIHPGEKLNRCHESGDCFNKSSFHSYQSNHTGEKSYRCDSCGKGFS
SSTGLIIHYRTHTGEKPYKCEECGKCFSQSSNFQCHQRVHTEEKPYKCEECGKGFGWS
VNLRVHQRVHRGEKPYKCEECGKGFTQAAHFHIHQRVHTGEKPYKCDVCGKGFSHNSP
LICHRRVHTGEKPYKCEACGKGFTRNTDLHIHFRVHTGEKPYKCKECGKGFSQASNLQ
VHQNVHTGEKRFKCETCGKGFSQSSKLQTHQRVHTGEKPYRCDVCGKDFSYSSNLKLH
QVIHTGEKPYKCEECGKGFSWRSNLHAHQRVHSGEKPYKCEQCDKSFSQAIDFRVHQR
VHTGEKPYKCGVCGKGFSQSSGLQSHQRVHTGEKPYKCDVCGKGFRYSSQFIYHQRGH
TGEKPYKCEECGKGFGRSLNLRHHQRVHTGEKPHICEECGKAFSLPSNLRVHLGVHTR
EKLFKCEECGKGFSQSARLEAHQRVHTGEKPYKCDICDKDFRHRSRLTYHQKVHTGKK
L"
BASE COUNT 991 a 601 c 717 g 766 t
ORIGIN
1 acttccgccc cggaaagcga ggccgccacc atcttttggg tccgggagga ttgagtcatc
61 gggctccaat gcgtggggat gtttaccgcc gtttatccgg gatagagact ccatcgtgct
121 gacagcatcc ttttattcac cgcctccgaa tttgcaaaga ggaggaagga gggacttctt
181 ggcttctccc agcatagccc cagttatgcc atctcagaac tatgaccttc cccagaagaa
241 gcaggagaaa atgaccaagt ttcaggaggc tgtgacattc aaggatgtgg ctgtggtctt
301 ctccagggag gaactgcgac tgctcgatct tacccagagg aagctgtacc gagatgtcat
361 ggtggagaac ttcaagaacc tggttgcagt ggggcatctt cccttccaac cagatatggt
421 atcccaattg gaagcagaag aaaagctttg gatgatggaa acagaaaccc aaagaagcag
481 caagcatcaa aataagatgg aaacactcca aaaatttgca ttaaaatacc tttcaaatca
541 agagctgtcc tgctggcaaa tctggaaaca ggttgcaagt gaattaacca ggtgtcttca
601 ggggaagagt tcccagttat tacaaggtga ctctattcag gtttctgaaa atgagaacaa
661 tataatgaac cctaaaggag atagctctat ttatattgaa aatcaagagt ttccattttg
721 gagaacccag cattcttgcg ggaatacata tctgagtgag tcacagattc agagtagagg
781 taagcaaatt gatgtgaaaa ataacctgca aatacatgaa gacttcatga agaaatcacc
841 atttcatgag catattaaaa ctgacacaga accaaaaccc tgcaaaggta atgaatatgg
901 caaaatcatt agtgatggct ccaaccagaa attaccctta ggagagaaac cccatccatg
961 tggtgagtgt ggaaggggct tcagttatag cccaaggctt ccccttcatc cgaatgttca
1021 cacaggagaa aaatgcttca gtcaaagctc acatctgcga actcatcaga gaattcaccc
1081 aggagagaaa ctcaatagat gtcatgaatc tggtgattgc ttcaataaga gctcttttca
1141 ttcttatcaa tctaatcata caggagagaa gtcttataga tgcgacagtt gcggcaaggg
1201 attcagtagc agcacgggtc ttatcattca ttacagaact catactggag agaaacccta
1261 taaatgcgag gaatgtggta aatgctttag tcaaagttca aattttcagt gccatcagag
1321 agtccacact gaagaaaaac catacaaatg cgaagagtgt ggtaagggct tcggttggag
1381 tgttaatctc cgtgttcacc agagggtcca caggggtgag aagccctata aatgtgagga
1441 atgtggtaag ggcttcactc aggctgcaca ttttcacatc catcagagag tccacactgg
1501 agagaaaccc tacaagtgtg atgtgtgtgg taagggcttc agccacaatt caccattaat
1561 atgccatcgg agagtccaca caggagagaa gccatacaag tgtgaggcgt gtgggaaagg
1621 ctttacccgt aatacagatc tgcatattca tttcagagtt cacacgggag agaaacccta
1681 taaatgtaag gagtgtggta agggcttcag tcaggcttca aatcttcaag tccatcagaa
1741 tgtccacact ggggagaaac gattcaagtg tgaaacgtgt gggaagggct tcagtcagtc
1801 ctcaaagctt caaacccatc agcgagtcca cactggagag aaaccatata gatgtgatgt
1861 gtgtggtaag gacttcagtt atagttcaaa tcttaaacta caccaagtaa ttcacactgg
1921 agaaaaacca tataaatgtg aggaatgtgg gaagggcttc agttggagat caaatcttca
1981 tgcacatcaa agagttcact caggagaaaa accctataaa tgtgagcagt gtgataagag
2041 cttcagtcag gccatagatt ttcgggtaca tcagagagtc catactggag agaagccata
2101 caaatgtggt gtctgtggta agggcttcag tcagtcctct ggtcttcaat cccatcagag
2161 agtccacacg ggggaaaagc catacaaatg tgatgtgtgt ggaaagggct ttagatacag
2221 ttcgcagttt atataccatc agagaggcca cactggagaa aaaccttaca aatgtgaaga
2281 gtgtgggaaa ggctttggta ggagcttgaa tcttcgccat catcagaggg tccacacggg
2341 agagaaaccc catatatgtg aggagtgtgg taaggccttc agtctcccct caaatcttcg
2401 agtccacctg ggtgttcaca ccagggaaaa actctttaaa tgtgaagagt gtggtaaagg
2461 cttcagtcag agtgcacgtc ttgaagccca tcagagagtc cacactggag aaaaaccata
2521 caaatgtgac atatgtgata aggacttccg tcaccgttca cgtcttacat atcatcagaa
2581 agtccatact ggtaaaaagc tttagaaatg agaaatgtgt taccaacttt tgtctgaatg
2641 cacatcttca agtttttggc tagtccatgc tggtggtaaa ccctgtaaaa ctactgagag
2701 tggaaggggg tttgttcaca cttggaatct ttctaacaaa tccatcaaga tgataacaca
2761 gaaccatgaa caggaataga actcgtattt aggggagaaa tagggctggt ggctctcttg
2821 gtaagatcta gttaatataa atgatcacct ttcattgtga atatatgcct gaagataatg
2881 tgtggaagga tatttgccat atgctaactg gttttttggc cagggagagt tttgggttat
2941 tatccctttt ctttaatttt cattttatac ttacagtgat cattattttc ataaaagctg
3001 taaagctatg aaaaatgaat aaaattacta aaaattttct gtaaaaaaaa aaaaaaaaga
3061 aaaaaaaaaa aaaaa
//