LOCUS BC047553 4509 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens calmodulin 2 (phosphorylase kinase, delta), mRNA (cDNA
clone IMAGE:5302800), with apparent retained intron.
ACCESSION BC047553
VERSION BC047553.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4509)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4509)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 77 Row: k Column: 1
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4509
/db_xref="H-InvDB:HIT000098656"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5302800"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1379 a 749 c 872 g 1509 t
ORIGIN
1 agattgctca tgtaactctt gagtttacat gtaatcaaca tatgctcatt gaaaacggga
61 ttgcttcaag aggactttga gtccagggtg attaggtaag taaaagatgt aaaaaggtag
121 aaaatttttg tcacttgagt ctaaataatt gttcttataa gtgccaacgc ctgtttctgt
181 taggctcaga agatcaaagg atttggctct tttaaaatat agaaagctct agcttcagct
241 agaatttagg cctttagtaa tagccctaat ttttatgaag ccattttgtt ccagtgatct
301 tttggtgaga gatgctatgt aagtactatt cttcagaatt aggtgtcttt ttaccctaat
361 gaaataattt agattgcttt tgatacaggt aaaacaaata tcctggcttc cataattgta
421 gaaaaaactt catataggaa tccttgttgt atcaaagtag cacctgatgg gaatgaacag
481 acaggaatgg atgaaggata gcagtttgcg ttccatttca agcctatggg ctcacacatt
541 tattcagata agaacaccac ctttcactag ataaactcca acagtattca tgcatacttt
601 tgaatggcat gtaggaaatg tttgataggt acataatgta ttcacttcag gtcactaatg
661 taatacgggg tcgtgctcct tagtgttgac agatcaccta tggttctcca aaatgaacat
721 tctagtacag gaggtctagg gaggaacctg agagtatact aatgcctagg aactttctct
781 ggagtggcaa gagcagtggg aagaattatg tcaatagcta cagaaataag ggagtaagaa
841 caagtcatct ctctagtgaa ttcttcttca ctttactgag ataaacatac atgttaatga
901 gcttgagttt tcccaaaagt ataattcttc tggttcttct aagaaaatgg cactccctgg
961 aaacaaggaa gaaccaaatt tattcgcctt tgtagcagtt gggaaagtta gtgctaggaa
1021 gtcttattga tttatagtag gctttaatct ggatattgct ggtaaagttt attctaaaac
1081 ctgaactctg gataagtaat acaaaaagct tctcaacctt ccaagcaaaa ttgagagctt
1141 tcaggttatg tgagtaattt ggtctcttgg gtgcttaatt cattccttga agctcatttt
1201 tgtgatctct tccaagattg catttgcttg gaggtaggga gttagacaag atggtatgag
1261 gtccctaaat tttgactttc caagcaaaat tggacagtgg ttcctaaatt gctaacatcc
1321 tcgtttcttc ctaaggcttc tcatgtttca tatatagtag ccttcccaaa atcccatttc
1381 ccaccccccc ccccccaacc catgtagaga gaacgaacct gtctcccttc ctgtacagag
1441 tacgggatcc ttcaactttc acacaggctg cagtgtctgc cacacattta gctcaacttt
1501 tttttagcct taaagtgatg tccgctgcat ctgtcgctgg gttgcacctt gtggatttag
1561 tttgcataaa ttttctcagc ttaaacaaag ttaacattga atagagtaag cttaccataa
1621 agggcttaat aaatgccatg catgtctaca ttcggtgtgg aaattgagct agtcaggttg
1681 atatttaaca ttgtaggttc tttgttaatt tatatgaaat aatggttatc atttaactct
1741 tcaggttagc tttgtacata gcatctcact ttgcacaaca accctgcaag gtaagtattg
1801 ttattcttgt gctacaaatg aagttgactg agaggaggag taccacgtcc aaggtcacac
1861 agctattaaa tggcagggct gggatactgg cctgtgactc agaacttgat gctttccccc
1921 cacgccacgc atgccaggtt gcccttcctt tcagaaatgg tggaagtcct gcaaaatgca
1981 ataaactgaa gtaatgtagc ttctattaat acaaagtaaa taactcagat ttactggatt
2041 ttaaacctta ttccttgggt aaacaatctg tgactgactt cacaccaaat atttgttggc
2101 ggaggatttg gactttaggg ataaaagtgg atacattttt tattttacaa actctgtatt
2161 tgaacttaat tattggctct tcaattttac gttaccagct tttttttttt ttttttttaa
2221 tgaatttgat ttacatcatg gtcaaacaaa aattgttgag cagggaaaat aaactacttt
2281 ctggattcct tcttgaattt tctcatgtgc cctagagaaa atgtgttcca cattaaggtg
2341 ttactttttc caggggtgtg ttcatttaaa aagaatgaag ccaggcaatg tttatttttc
2401 ttttacctat aaataaatga atggattaat cattgtatac ttgactccca tgttggtagg
2461 gattttagat aggaggctat ttcttgtctg tgcttctcaa taccccataa gcagttgctt
2521 catggatgta tatactaata agcagtgaaa gaaagtgcat gttcaaagaa tacaacaagg
2581 agtctggata ttttgcaatc atctttatat attacggtgc tctgaattaa aagctaaaag
2641 ttactgggta tgtctgacac cttagtgctt tatctttgtt ctactaattt tctgtgcccc
2701 aatcccactt aaccctagcc tcattcctta tctgtaagat aggggataat accactgtaa
2761 ggttattatt aagattgaat aaggataaaa tttataatgg gttttagcaa atggcagaaa
2821 atattttctg aagaaaacca agtgctatta aaaaaacatc acaagccttg ggcttacttt
2881 gggattttaa aaaccaagag aaaatggatg gctgaacttt caaacatttg gtaaatatta
2941 tagtattgta gttcagagct ctggattctt tgcattttgc ctgctgggtg agaaggaata
3001 aaagtttgtg cctttttttt tttttaatca ctttaatttc aaaacaatgt gtttaaccat
3061 ttgtgggagt aattttcatt ttgtgagcct gaagcatttt gattcagtgg gaatttctgg
3121 tgatttatat ctggaataga agtgagctta agtttagcta ttctaacgtt gaaaaaggaa
3181 gcaatgtttc tattggattc taaagtatat tttcaaaaat attctgaagt atttgtatat
3241 cttaaacttg gagttaagac agcttagctt tgaagataag agaaactaga tgtgtgcatt
3301 ttctatccag atgtgtttgt tgctggaact aaatgaaaca gtacatggta acccttgaaa
3361 ggttttaaac ttgtttctgt aactgctaat ctacatactc tcaagtcact aaccttcctc
3421 tttgatctct ttgtaggctg accaactgac tgaagagcag attgcagaat tcaaagaagc
3481 tttttcacta tttgacaaag atggtgatgg aactataaca acaaaggaat tgggaactgt
3541 aatgagatct cttgggcaga atcccacaga agcagagtta caggacatga ttaatgaagt
3601 agatgctgat ggtaatggca caattgactt ccctgaattt ctgacaatga tggcaagaaa
3661 aatgaaagac acagacagtg aagaagaaat tagagaagca ttccgtgtgt ttgataagga
3721 tggcaatggc tatattagtg ctgcagaact tcgccatgtg atgacaaacc ttggagagaa
3781 gttaacagat gaagaagttg atgaaatgat cagggaagca gatattgatg gtgatggtca
3841 agtaaactat gaagagtttg tacaaatgat gacagcaaag tgaagacctt gtacagaatg
3901 tgttaaattt cttgtacaaa attgtttatt tgccttttct ttgtttgtaa cttatctgta
3961 aaaggtttct ccctactgtc aaaaaaatat gcatgtatag taattaggac ttcattcctc
4021 catgttttct tcccttatct tactgtcatt gtcctaaaac cttattttag aaaattgatc
4081 aagtaacatg ttgcatgtgg cttactctgg atatatctaa gcccttctgc acatctaaac
4141 ttagatggag ttggtcaaat gagggaacat ctgggttatg cattttttaa agtagttttc
4201 tttaggaact gtcagcatgt tgttgttgaa gtgtggagtt gtaactctgc gtggactatg
4261 gacagtcaac aatatgtact taaaagttgc actattgcaa aacgggtgta ttatccaggt
4321 actcgtacac tatttttttg tactgctggt cctgtaccag aaacattttc ttttattgtt
4381 acttgctttt taaactttgt ttagccactt aaaatctgct tatggcacaa tttgcctcaa
4441 aatccattcc aagttgtata tttgttttcc aataaaaaaa ttacaattta cacaaaaaaa
4501 aaaaaaaaa
//