LOCUS BC047521 3904 bp mRNA linear HUM 07-AUG-2008 DEFINITION Homo sapiens colony stimulating factor 1 receptor, mRNA (cDNA clone MGC:26296 IMAGE:4819527), complete cds. ACCESSION BC047521 VERSION BC047521.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3904) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3904) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 32 Row: p Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27262658. FEATURES Location/Qualifiers source 1..3904 /db_xref="H-InvDB:HIT000053155" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26296 IMAGE:4819527" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3904 /gene="CSF1R" /gene_synonym="C-FMS" /gene_synonym="CD115" /gene_synonym="CSFR" /gene_synonym="FIM2" /db_xref="GeneID:1436" /db_xref="HGNC:HGNC:2433" /db_xref="MIM:164770" CDS 196..3114 /gene="CSF1R" /gene_synonym="C-FMS" /gene_synonym="CD115" /gene_synonym="CSFR" /gene_synonym="FIM2" /codon_start=1 /product="colony stimulating factor 1 receptor" /protein_id="AAH47521.1" /db_xref="GeneID:1436" /db_xref="HGNC:HGNC:2433" /db_xref="MIM:164770" /translation="MGPGVLLLLLVATAWHGQGIPVIEPSVPELVVKPGATVTLRCVG NGSVEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVK DPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWH GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGE AAQIVCSASSVDVNFDVFLQHNNTKLAIHQQSDFHNNRYQKVLTLNLDQVDFQHAGNY SCVASNVQGKHSTSMFFRVVESAYLNLSSEQNLIQEVTVGEGLNLKVMVEAYPGLQGF NWTYLGPFSDHQPEPKLANVTTKDTYRHTFTLSLPRLKPSEAGRYSFLARNPGGWRAL TFELTLRYPPEVSVIWTFINGSGTLLCAASGYPQPNVTWLQCSGHTDRCDEAQVLQVW DDPYPEVLSQEPFHKVTVQSLLTVETLEHNQTYECRAHNSVGSGSWAFIPISAGAHTH PPDEFLFTPVVVACMSIMALLLLLLLLLLYKYKQKPKYQVRWKIIESYEGNSYTFIDP TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA DEKESLMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAM LGPSLSPGQDPEGGVDYKNIHLEKKYVRRDSGFSSQGVDTYVEMRPVSTSSNDSFSEQ DLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA QEDRRERDYTNLPSSSRSGGSGSSSSELEEESSSEHLTCCEQGDIAQPLLQPNNYQFC " BASE COUNT 891 a 1171 c 1059 g 783 t ORIGIN 1 ggtggccttg cctagctaaa aggggaagaa gaggatcagc ccaaggagga ggaagaggaa 61 aacaagacaa acagccagtg cagaggagag gaacgtgtgt ccagtgtccc gatccctgcg 121 gagctagtag ctgagagctc tgtgccctgg gcaccttgca gccctgcacc tgcctgccac 181 ttccccaccg aggccatggg cccaggagtt ctgctgctcc tgctggtggc cacagcttgg 241 catggtcagg gaatcccagt gatagagccc agtgtccccg agctggtcgt gaagccagga 301 gcaacggtga ccttgcgatg tgtgggcaat ggcagcgtgg aatgggatgg ccccccatca 361 cctcactgga ccctgtactc tgatggctcc agcagcatcc tcagcaccaa caacgctacc 421 ttccaaaaca cggggaccta tcgctgcact gagcctggag accccctggg aggcagcgcc 481 gccatccacc tctatgtcaa agaccctgcc cggccctgga acgtgctagc acaggaggtg 541 gtcgtgttcg aggaccagga cgcactactg ccctgtctgc tcacagaccc ggtgctggaa 601 gcaggcgtct cgctggtgcg tgtgcgtggc cggcccctca tgcgccacac caactactcc 661 ttctcgccct ggcatggctt caccatccac agggccaagt tcattcagag ccaggactat 721 caatgcagtg ccctgatggg tggcaggaag gtgatgtcca tcagcatccg gctgaaagtg 781 cagaaagtca tcccagggcc cccagccttg acactggtgc ctgcagagct ggtgcggatt 841 cgaggggagg ctgcccagat cgtgtgctca gccagcagcg ttgatgttaa ctttgatgtc 901 ttcctccaac acaacaacac caagctcgca atccatcaac aatctgactt tcataataac 961 cgttaccaaa aagtcctgac cctcaacctc gatcaagtag atttccaaca tgccggcaac 1021 tactcctgcg tggccagcaa cgtgcagggc aagcactcca cctccatgtt cttccgggtg 1081 gtagagagtg cctacttgaa cttgagctct gagcagaacc tcatccagga ggtgaccgtg 1141 ggggaggggc tcaacctcaa agtcatggtg gaggcctacc caggcctgca aggttttaac 1201 tggacctacc tgggaccctt ttctgaccac cagcctgagc ccaagcttgc taatgttacc 1261 accaaggaca catacaggca caccttcacc ctctctctgc cccgcctgaa gccctctgag 1321 gctggccgct actccttcct ggccagaaac ccaggaggct ggagagctct gacgtttgag 1381 ctcacccttc gatacccccc agaggtaagc gtcatatgga cattcatcaa cggctctggc 1441 acccttttgt gtgctgcctc tgggtacccc cagcccaacg tgacatggct gcagtgcagt 1501 ggccacactg ataggtgtga tgaggcccaa gtgctgcagg tctgggatga cccataccct 1561 gaggtcctga gccaggagcc cttccacaag gtgacggtgc agagcctgct gactgttgag 1621 accttagagc acaaccaaac ctacgagtgc agggcccaca acagcgtggg gagtggctcc 1681 tgggccttca tacccatctc tgcaggagcc cacacgcatc ccccggatga gttcctcttc 1741 acaccagtgg tggtcgcctg catgtccatc atggccttgc tgctgctgct gctcctgctg 1801 ctattgtaca agtataagca gaagcccaag taccaggtcc gctggaagat catcgagagc 1861 tatgagggca acagttatac tttcatcgac cccacgcagc tgccttacaa cgagaagtgg 1921 gagttccccc ggaacaacct gcagtttggt aagaccctcg gagctggagc ctttgggaag 1981 gtggtggagg ccacggcctt tggtctgggc aaggaggatg ctgtcctgaa ggtggctgtg 2041 aagatgctga agtccacggc ccatgctgat gagaaggagt ccctcatgtc cgagctgaag 2101 atcatgagcc acctgggcca gcacgagaac atcgtcaacc ttctgggagc ctgtacccat 2161 ggaggccctg tactggtcat cacggagtac tgttgctatg gcgacctgct caactttctg 2221 cgaaggaagg ctgaggccat gctgggaccc agcctgagcc ccggccagga ccccgaggga 2281 ggcgtcgact ataagaacat ccacctcgag aagaaatatg tccgcaggga cagtggcttc 2341 tccagccagg gtgtggacac ctatgtggag atgaggcctg tctccacttc ttcaaatgac 2401 tccttctctg agcaagacct ggacaaggag gatggacggc ccctggagct ccgggacctg 2461 cttcacttct ccagccaagt agcccagggc atggccttcc tcgcttccaa gaattgcatc 2521 caccgggacg tggcagcgcg taacgtgctg ttgaccaatg gtcatgtggc caagattggg 2581 gacttcgggc tggctaggga catcatgaat gactccaact acattgtcaa gggcaatgcc 2641 cgcctgcctg tgaagtggat ggccccagag agcatctttg actgtgtcta cacggttcag 2701 agcgacgtct ggtcctatgg catcctcctc tgggagatct tctcacttgg gctgaatccc 2761 taccctggca tcctggtgaa cagcaagttc tataaactgg tgaaggatgg ataccaaatg 2821 gcccagcctg catttgcccc aaagaatata tacagcatca tgcaggcctg ctgggccttg 2881 gagcccaccc acagacccac cttccagcag atctgctcct tccttcagga gcaggcccaa 2941 gaggacagga gagagcggga ctataccaat ctgccgagca gcagcagaag cggtggcagc 3001 ggcagcagca gcagtgagct ggaggaggag agctctagtg agcacctgac ctgctgcgag 3061 caaggggata tcgcccagcc cttgctgcag cccaacaact atcagttctg ctgaggagtt 3121 gacgacaggg agtaccactc tcccctcctc caaacttcaa ctcctccatg gatggggcga 3181 cacggggaga acatacaaac tctgccttcg gtcatttcac tcaacagctc ggcccagctc 3241 tgaaacttgg gaaggtgagg gattcagggg aggtcagagg atcccacttc ctgagcatgg 3301 gccatcactg ccagtcaggg gctgggggct gagccctcac cccccgcctc ccctactgtt 3361 ctcatggtgt tggcctcgtg tttgctatgc caactagtag aaccttcttt cctaatcccc 3421 ttatcttcat ggaaatggac tgactttatg cctatgaagt ccccaggagc tacactgata 3481 ctgagaaaac caggctcttt ggggctagac agactggcag agagtgagat ctccctctct 3541 gagaggagca gcagatgctc acagaccaca ctcagctcag gccccttgga gcaggatggc 3601 tcctctaaga atctcacagg acctcttagt ctctgcccta tacgccgcct tcactccaca 3661 gcctcacccc tcccaccccc atactggtac tgctgtaatg agccaagtgg cagctaaaag 3721 ttgggggtgt tctgcccagt cccgtcattc tgggctagaa ggcaggggac cttggcatgt 3781 ggctggccac accaagcagg aagcacaaac tcccccaagc tgactcatcc taactaacag 3841 tcacgccgtg ggatgtctct gtccacatta aactaacagc attaatacaa aaaaaaaaaa 3901 aaaa //