LOCUS BC047515 3407 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens paraneoplastic antigen MA2, mRNA (cDNA clone MGC:51254
IMAGE:5294654), complete cds.
ACCESSION BC047515
VERSION BC047515.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3407)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3407)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: h Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61676176.
FEATURES Location/Qualifiers
source 1..3407
/db_xref="H-InvDB:HIT000098634"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51254 IMAGE:5294654"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3407
/gene="PNMA2"
/gene_synonym="KIAA0883"
/gene_synonym="MA2"
/gene_synonym="MM2"
/gene_synonym="RGAG2"
/db_xref="GeneID:10687"
/db_xref="HGNC:HGNC:9159"
/db_xref="MIM:603970"
CDS 676..1770
/gene="PNMA2"
/gene_synonym="KIAA0883"
/gene_synonym="MA2"
/gene_synonym="MM2"
/gene_synonym="RGAG2"
/codon_start=1
/product="paraneoplastic antigen MA2"
/protein_id="AAH47515.1"
/db_xref="GeneID:10687"
/db_xref="HGNC:HGNC:9159"
/db_xref="MIM:603970"
/translation="MALALLEDWCRIMSVDEQKSLMVTGIPADFEEAEIQEVLQETLK
SLGRYRLLGKIFRKQENANAVLLELLEDTDVSAIPSEVQGKGGVWKVIFKTPNQDTEF
LERLNLFLEKEGQTVSGMFRALGQEGVSPATVPCISPELLAHLLGQAMAHAPQPLLPM
RYRKLRVFSGSAVPAPEEESFEVWLEQATEIVKEWPVTEAEKKRWLAESLRGPALDLM
HIVQADNPSISVEECLEAFKQVFGSLESRRTAQVRYLKTYQEEGEKVSAYVLRLETLL
RRAVEKRAIPRRIADQVRLEQVMAGATLNQMLWCRLRELKDQGPPPSFLELMKVIREE
EEEEASFENESIEEPEERDGYGRWNHEGDD"
BASE COUNT 889 a 789 c 883 g 846 t
ORIGIN
1 agaccaccag ctaatggatg cggagcggag ggcccgctga ccgctctccg cgcctggagc
61 agcttggctt ggctggagct aagagccaga cacaccactg tgtggaggtg ggtgatgtct
121 tcctgtgcta aaaggcgaat aaataagctc ctcacctctc gcggaacact cgggaacaca
181 tcaacagggg tccaagccgc cctgctggga ggcttctctt caagagttct gggtcccaga
241 gtggaaggca ttttcccatc aactggagag agacgaaaca tcagagacca ggaggctgtg
301 gagaaagcag ctgtcccagg tgcctcaact atcagagaag ggtcagcgtc acgtggctgc
361 cagcatcttt gagaaaatca ctggcaatcg gacttcagag ctgcgggcac aggtgtggtt
421 agaactgaga tacgacctgc ccacctgggt caggcctaaa gacaagaagt cctgagttct
481 tgccactgag taggccaggg tcatttgtcc agaaaacttt gtgactgtct ttgagtgacc
541 tagtctggga cccattcatt ggtgggttct aaggttagaa gctcatccag gatattttca
601 atattaagtc agtgcatagc tgcaccacta acaaattggt gcctgtagag tcagagtggg
661 tcaattctta ggacaatggc gctggcactg ttagaggact ggtgcaggat aatgagtgtg
721 gatgagcaga agtcactgat ggttacgggg ataccggcgg actttgagga ggctgagatt
781 caggaggtcc ttcaggagac tttaaagtct ctgggcaggt atagactgct tggcaagata
841 ttccggaagc aggagaatgc caatgctgtc ttactagagc ttctggaaga tactgatgtc
901 tcggccattc ccagtgaggt ccagggaaag gggggtgtct ggaaggtgat ctttaagacc
961 cctaatcagg acactgagtt tcttgaaaga ttgaacctgt ttctagaaaa agaggggcag
1021 acggtctcgg gtatgtttcg agccctgggg caggagggcg tgtctccagc cacagtgccc
1081 tgcatctcac cagaattact ggcccatttg ttgggacagg caatggcaca tgcgcctcag
1141 cccctgctac ccatgagata ccggaaactg cgagtattct cagggagtgc tgtcccagcc
1201 ccagaggaag agtcctttga ggtctggttg gaacaggcca cggagatagt caaagagtgg
1261 ccagtaacag aggcagaaaa gaaaaggtgg ctggcggaaa gcctgcgggg ccctgccctg
1321 gacctcatgc acatagtgca ggcagacaac ccgtccatca gtgtagaaga gtgtttggag
1381 gcctttaagc aagtgtttgg gagcctagag agccgcagga cagcccaggt gaggtatctg
1441 aagacctatc aggaggaagg agagaaggtc tcagcctatg tgttacggct agaaaccctg
1501 ctccggagag cggtggagaa acgcgccatc cctcggcgta ttgcggacca ggtccgcctg
1561 gagcaggtca tggctggggc cactcttaac cagatgctgt ggtgccggct tagggagctg
1621 aaggatcagg gcccgccccc cagcttcctt gagctaatga aggtaatacg ggaagaagag
1681 gaggaagagg cctcctttga gaatgagagt atcgaagagc cagaggaacg agatggctat
1741 ggccgctgga atcatgaggg agacgactga aaaccacctg ggggcaggac ccacagccag
1801 tgggctaaga cctttaaaaa atttttttct ttaatgtatg ggactgaaat caaaccatga
1861 aagccaatta ttgaccttcc ttccttcctt ccttccctcc cttcctcctt ctctccttct
1921 ctcctcctct ctcctctcct ctcctctctt tccttccttc cttccttttt tctttttctc
1981 tttcttcttt atttcttggg tctcactctc atcacccagg ctagagtgca gtggcacaaa
2041 aatctcggct cactgcagcc ttgacttccc aggctcaggc tcaggtgatc ctcacacctt
2101 agcctcccaa gtacctggga ctacaggcac gcaccaccat gcctagctat tcttttgtat
2161 ttttggtaga gacagggttt tgctgtgttg ctcaggctgg tctggaaccc ctaggctcaa
2221 atgatgtgcc caactcggcc tcccaaagtg ctgggattac aggcatgaac cgccatgcct
2281 ggcccttgat tttttctttt taagaaaaaa atatctagga gtttcttaga ccctatgtag
2341 attattaatg aacaaaagat taaactccaa aatattaaat agtaagcctg aaggaatctg
2401 aaacacttgt acttccaatt ttctttaaat aatcccaaat agaccagaat tggcccatac
2461 catagaagaa agaattggca gtcaaaaaaa aaaatacctt ttgtaatgtt tgaaaaataa
2521 agctgtttga cttgtcaggt gttttccttt ctcaaatcag caaattctct ctgagtgcct
2581 ggctttgtga gacactgtac aaggagttac aagactacag ctataacctg cagttgagca
2641 gttataaacc tacaaaatgg gccctgccct cagagaggtt ccagtctaga tgaggagctg
2701 atctagacag gtaaaaggct aactaaccct ttgtgtaaat aagttcatca ccccagtaaa
2761 agtgtcatca cccagtgaat aggaccacct ctgcctgcag atttttgttg ttgttgttgt
2821 cattgttgtt gttgttttaa cctgggaagt gttcttcctg cctttctgct aggtgtcaga
2881 tagatggtcc cagagctagg tgctgtgtca ggccctgaag acacagatga ctcaacctaa
2941 gctttacttt ccagaggtcc acagcctgag aggtgtcccc aaagaaaggg ggacatgagg
3001 ggactgcatg cttgagagca gggttgttta gggcaggttt ggatttagtg agcaggctgg
3061 tttgcttaga gaaggctttt agtggcaaca aaggatgaag aggagagaaa aggaactcac
3121 atttattgaa ggcctactgt gtgcaaagtg tttcatgtat atctcattga atgtatacag
3181 ccaccctgtt gtggtataat tttgctctta taaagagaaa gaccgaagct cagatgagtt
3241 aagtggtctc ctcaacacca aaatgccaag aagtgatgga gcctagacag aagcccagaa
3301 ctttctgact cacactagtc catcctctac catcacgatg actttcaaat tgtgctctgc
3361 agttctgcag attttctagc agtgccatct ccaaaaaaaa aaaaaaa
//