LOCUS BC047505 2359 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens neurexophilin 1, mRNA (cDNA clone MGC:48545
IMAGE:5313563), complete cds.
ACCESSION BC047505
VERSION BC047505.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2359)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2359)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: n Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23097337.
FEATURES Location/Qualifiers
source 1..2359
/db_xref="H-InvDB:HIT000053149"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48545 IMAGE:5313563"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2359
/gene="NXPH1"
/gene_synonym="Nbla00697"
/gene_synonym="NPH1"
/db_xref="GeneID:30010"
/db_xref="HGNC:HGNC:20693"
/db_xref="MIM:604639"
CDS 337..1152
/gene="NXPH1"
/gene_synonym="Nbla00697"
/gene_synonym="NPH1"
/codon_start=1
/product="neurexophilin 1"
/protein_id="AAH47505.1"
/db_xref="GeneID:30010"
/db_xref="HGNC:HGNC:20693"
/db_xref="MIM:604639"
/translation="MQAACWYVLFLLQPTVYLVTCANLTNGGKSELLKSGSSKSTLKH
IWTESSKDLSISRLLSQTFRGKENDTDLDLRYDTPEPYSEQDLWDWLRNSTDLQEPRP
RAKRRPIVKTGKFKKMFGWGDFHSNIKTVKLNLLITGKIVDHGNGTFSVYFRHNSTGQ
GNVSVSLVPPTKIVEFDLAQQTVIDAKDSKSFNCRIEYEKVDKATKNTLCNYDPSKTC
YQEQTQSHVSWLCSKPFKVICIYISFYSTDYKLVQKVCPDYNYHSDTPYFPSG"
BASE COUNT 711 a 497 c 511 g 640 t
ORIGIN
1 gccaagcctt ggctcccgcg aaccaatcct gagcgcgacc cgggcactgg gacggcgact
61 ccgccaaagc tggacgaggc agccggaccc gtctgcgctc gagcatggag acggagcgcc
121 tgggagggca cgtccggggc gctggagacg ccaggcccga gtagcttctc catggagcct
181 gcccagagcg gtcccttctc gcaggattcg ccccaagtcc tgtgcggctg ctgagagcgc
241 tccttgctct gtaaagtgga tgtcaggtgg atctatgttt ctgaaggaac aaagactcaa
301 agaaggcacc gccaaggaag tttgagacgc gggagaatgc aggctgcgtg ctggtacgtg
361 cttttcctcc tgcagcccac cgtctacttg gtcacatgtg ccaatttaac gaacggtgga
421 aagtcagaac ttctgaaatc aggaagcagc aaatccacac taaagcacat atggacagaa
481 agcagcaaag acttgtctat cagccgactc ctgtcacaga cttttcgtgg caaagagaat
541 gatacagatt tggacctgag atatgacacc ccagaacctt attctgagca agacctctgg
601 gactggctga ggaactccac agaccttcaa gagcctcggc ccagggccaa gagaaggccc
661 attgttaaaa cgggcaagtt taagaaaatg tttggatggg gcgattttca ttccaacatc
721 aaaacagtga agctgaacct gttgataact gggaaaattg tagatcatgg caatgggaca
781 tttagtgttt atttcaggca taattcaact ggtcaaggga atgtatctgt cagcttggta
841 ccccctacaa aaatcgtgga atttgacttg gcacaacaaa ccgtgattga tgccaaagat
901 tccaagtctt ttaattgtcg cattgaatat gaaaaggttg acaaggctac caagaacaca
961 ctctgcaact atgacccttc aaaaacctgt taccaggagc aaacccaaag tcatgtatcc
1021 tggctctgct ccaagccctt taaggtgatc tgtatttaca tttcctttta tagtacagat
1081 tataaactgg tacagaaagt gtgccctgac tacaactacc acagtgacac accttacttt
1141 ccctcgggat gaaggtgaac atgggggtga gactgaagcc tgaggaatta aaggtcatat
1201 gacagggctg ttacctcaaa gaggaaggtc acatctgttg cctggaatgt gtctacactg
1261 ctgctcttgt caactggctg caaaatacac tagtggaaaa cactctgatg taatttctgc
1321 ccagtcagct tcatccctca gtataattgt aaatcatcac agattttgaa gtcacacctg
1381 aagacatgct ctcacatata gaggtacaca aacacaccgt catgcacatt tcagcttgcg
1441 tctatcatga ttcctgttga gagggctttc attgtctgac tcataatggt tcaggatcaa
1501 ctatcatcaa acggaaggat taactagaca gagaatgttt ctaacagttg ctgttatgga
1561 aatctctttt aaagtcttga gtacatgcta atcaataatc tccactcatg cattcctact
1621 gcttggagta gctgtactgg taaatactac tgtaggagta tctgcttgtt aaaatggaaa
1681 aatgtgtctt tagagctcag tattctttat tttacaaaca caacaaaatg tagtaacttt
1741 tttccagcat acagtaggca cattcaaagt ggtccaagat ggctcttttt tctttgaaag
1801 gggcctgttc tcagtaaaga tgagcaaaca tttggaattt acatgtgggc agacattggg
1861 ataacaactt tcatcaccaa tcattggact tttgtgaagt cgacaccagc taaggctgct
1921 taaaataagt tctgatcatt atataagaag ggaaatgcct ggcagacacc atgtaagtta
1981 taagtgtctg tcttatcttt actacacata ttgtaacaaa ttcaatatcc tagtcttcat
2041 ttgtatgaat ggtttgtatt gtacatagtt taaccaagtg ttatttgagc tgcttattaa
2101 tattaacttg tacttgtctc tctgcttgtt attggttaag aaaaaaggat atgaggaatt
2161 cattttatca atgtagctgt gaaggccatt aaaaagacaa acttaatgta cagagcattt
2221 tattcagatc aagtattgtt gaaagctata catatacaac attacagtct gtctgtattt
2281 agatatttta tttctggaaa aaatgaaatg tacataaaaa taaaacactt aaagttgagt
2341 tccaaaaaaa aaaaaaaaa
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