LOCUS BC047496 3344 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens syntaxin 2, mRNA (cDNA clone MGC:51014 IMAGE:5296500),
complete cds.
ACCESSION BC047496
VERSION BC047496.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3344)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3344)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: j Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37577161.
FEATURES Location/Qualifiers
source 1..3344
/db_xref="H-InvDB:HIT000053145"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51014 IMAGE:5296500"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3344
/gene="STX2"
/gene_synonym="EPM"
/gene_synonym="MGC51014"
/db_xref="GeneID:2054"
/db_xref="HGNC:HGNC:3403"
/db_xref="MIM:132350"
CDS 168..1031
/gene="STX2"
/gene_synonym="EPM"
/gene_synonym="MGC51014"
/codon_start=1
/product="syntaxin 2"
/protein_id="AAH47496.1"
/db_xref="GeneID:2054"
/db_xref="HGNC:HGNC:3403"
/db_xref="MIM:132350"
/translation="MRDRLPDLTACRKNDDGDTVVVVEKDHFMDDFFHQVEEIRNSID
KITQYVEEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQD
ESGNRTSVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTT
DDELEEMLESGKPSIFTSDIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDM
AMFVETQGEMINNIERNVMNATDYVEHAKEETKKAIKYQSKARRKLMFIIICVIVLLV
ILGIILATTLS"
BASE COUNT 930 a 676 c 768 g 970 t
ORIGIN
1 gcggagcgcg cggggcgcgg ttgccgtggc agcgccggct ccagggaggg ctgctggcgc
61 cgggccggga ccgcggggcc tgaggcggag accggagagc ccgcggcccg gccggaggca
121 gctcgggaca ggcttgagcg gcggggcgcg ctgcccggcc ggcggggatg cgggaccggc
181 tgccagacct gacggcgtgt aggaagaatg atgatggaga cacagttgtt gtggttgaga
241 aagatcattt catggatgat ttcttccatc aggtggagga gattagaaac agtattgata
301 aaataactca atatgttgaa gaagtaaaga aaaaccacag catcattctt tctgcaccaa
361 acccggaagg aaaaataaaa gaagagcttg aagatctgaa caaagaaatc aagaaaactg
421 cgaataaaat tcgagccaag ttaaaggcta ttgaacaaag ttttgatcag gatgagagtg
481 ggaaccggac ttcagtggat cttcggatac gaagaaccca gcattcggtg ctgtctcgga
541 agtttgtgga agccatggcg gagtacaatg aggcacagac tctgtttcgg gagcggagca
601 aaggccgcat ccagcgccag ctggagataa ctgggagaac caccacagac gacgagctag
661 aagagatgct ggagagcggg aagccatcca tcttcacttc cgacattata tcagattcac
721 aaattactag acaagctctc aatgaaatcg agtcacgtca caaggacatc atgaagctgg
781 agaccagcat ccgagagttg catgagatgt tcatggacat ggctatgttt gtggagactc
841 agggtgaaat gatcaacaac atagaaagaa atgttatgaa tgccacagac tatgtagaac
901 acgctaaaga agaaacaaaa aaagctatca aatatcagag caaggcaaga aggaaattga
961 tgttcattat tatttgtgta attgttttgc ttgtgatcct tggaattatc ctagcaacaa
1021 cattgtcata gcaaccatat cccaagagcc atttatcctt gagactcaga ccacatctgc
1081 aaccaaatca gcatcctgtc atttcgtgaa tgaatctcag acgctgtaac ccggcatcga
1141 gtgctgacct tgtaatgtat gagttcacgg aagaagcaca accgaacgtc ttgttcagtg
1201 acagcgccgt aagcacagtg ggtgtgatgc gtgaccctga atgacacact acagaatgtg
1261 agcagtgtga gacttctctc actggccttg aaataagaaa atattgaaca ttttaatatt
1321 aaaaatattt cagtgttaac aaatgtgcat gaagtttaat taggaaggaa tgctttatgt
1381 tatgaaggct tttttttttt ttttttgaga cggagtctcg ctttgtcatc caggctggag
1441 tgcagtggtg cgatctcagc tcactgcaac ctcagcctcc cgggttcaag caattctcct
1501 gcctcagcct cccgagtagc tgggattaca ggcatgggcc accacaccca gctaattttt
1561 tgtgttttct ttttagtaga gacggggttt taccatgctg gccaggctgg cctcaaactc
1621 ctgaccttgt gatccaccca cctcagcctc ccaaagtgct gggattacag gcgtgagtca
1681 ccgggcaggc tgttctgaag cttttagatc tcaggtctaa ggcttccttt ccctccctct
1741 cccagctagt ttgtgctaat taagagacct tttatactgt tttattgcct gtttgaagaa
1801 ataattttta tcacgttttt gtaagatatc tataatttta aatgtttata aattgtttaa
1861 tttattagca tcttaatgta ccccattttt atatactgaa tgtggccttt tgagtgaaat
1921 aggaagcttc atggtgttgg agccaccttt gtacagttgt ttaaagtttc ccattgtcac
1981 ggaaaacatt ggctgcaaag cccctcaaag ccctcaagtg ccttctgtga gtttaaatgt
2041 gctggtgccc tccagaaaag cctcggcctc agctccgttt ccgcctgttc cctcccccag
2101 gataatgaat ggttactgca ctgtaaagac cgtggtctct tttcactaaa taggagattc
2161 gagtttccca gtttacatga atgaagtctg aatttaagac ggtgatgaaa ctgaggttca
2221 gtactctcgg gactcgagga aattattcct gagacatgga gtaattctta caaatttaaa
2281 ctattgtaca gatccacata catgttgtta agtacctaat gttttgctga acttttaaaa
2341 gttaatttcc aaaatgtata gggattcatg ataattaaac ctttttattg ctcatttttt
2401 tagtagaaga atatcactta tttttagact tgtaaaatgt atgaactggt gagcggacat
2461 ctgttaagag agtcactagt cagaatgtta aaggagtgca tgcaggatgc cccaaatgtc
2521 gtgaactctt gttactcctg tatgtagtag tgtaagcatg tgacttttaa caccatttgg
2581 tttgaaacta atgtagagat gcctgattcc aaacaggtgt ggagaatatt gaacggctca
2641 gaagccgcgt cccttactta acacaattcc gaatctccct catccatgat gcgtccattg
2701 gatcactcgc tggtggtcac tgtgtggcag ttactagggg aattctgcct ctgactgttc
2761 tttttctttt ggtctttaaa caccctgtcg tgggatgtgc tcactgattt gtggctatgt
2821 tgaaggtatc acttgtcttg agggttttca atatttcagg atcatgctgg tggcaaaagg
2881 actccacgcc tctgtggaat catgtccaca gggggacctg cctcccgtga tgtcccacct
2941 ttccttcaag gtctgtcata tgagtcctcc ccttttacaa cacttattat ggtatttttc
3001 aagttattct tcttagattt gcagtaccta ctgaaatttg tgtttttata gttgaagtta
3061 ggaaaatgct atttgatttg tatttagata tttaagtcac ttgtccaatg atgtgtatgt
3121 ctaagcctca tgtaccgatt tgaagtcaga cttaaaaatg tatttacaga ttcacttgag
3181 actttttaat cggttcttca aatatttcat gtttacatta aaaatttcca gagaagcata
3241 aaagtattca ctttcctgcc ttgtcatttc tggaaagatt ttggggagat attttattgc
3301 atattaatta ataaattgtt ctactaggaa aaaaaaaaaa aaaa
//