LOCUS BC047482 4858 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens KIAA1219, mRNA (cDNA clone MGC:48341 IMAGE:5270777),
complete cds.
ACCESSION BC047482
VERSION BC047482.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4858)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4858)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: c Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34787408.
FEATURES Location/Qualifiers
source 1..4858
/db_xref="H-InvDB:HIT000053144"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48341 IMAGE:5270777"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4858
/gene="KIAA1219"
/gene_synonym="dJ1100H13.1"
/gene_synonym="RP5-1100H13.1"
/db_xref="GeneID:57148"
/db_xref="HGNC:HGNC:29221"
CDS 258..4742
/gene="KIAA1219"
/gene_synonym="dJ1100H13.1"
/gene_synonym="RP5-1100H13.1"
/codon_start=1
/product="KIAA1219"
/protein_id="AAH47482.1"
/db_xref="GeneID:57148"
/db_xref="HGNC:HGNC:29221"
/translation="MYSEWRSLHLVIQNDQGHTSVLHSYPESVGREVANAVVRPLGQV
LGTPSVAGSENLLKTDKEVKWTMEVICYGLTLPLDGETVKYCVDVYTDWIMALVLPKD
SIPLPVIKEPNQYVQTILKHLQNLFVPRQEQGSSQIRLCLQVLRAIQKLARESSLMAR
ETWEVLLLFLLQINDILLAPPTVQGGIAENLAEKLIGVLFEVWLLACTRCFPTPPYWK
TAKEMVANWRHHPAVVEQWSKVICALTSRLLRFTYGPSFPAFKVPDEDASLIPPEMDN
ECVAQTWFRFLHMLSNPVDLSNPAIISSTPKFQEQFLNVSGMPQELNQYPCLKHLPQI
FFRAMRGISCLVDAFLGISRPRSDSAPPTPVNRLSMPQSAAVSTTPPHNRRHRAVTVN
KATMKTSTVSTAHASKVQHQTSSTSPLSSPNQTSSEPRPLPAPRRPKVNSILNLFGSW
LFDAAFVHCKLHNGINRDSSMTAITTQASMEFRRKGSQMSTDTMVSNPMFDASEFPDN
YEAGRAEACGTLCRIFCSKKTGEEILPAYLSRFYMLLIQGLQINDYVCHPVLASVILN
SPPLFCCDLKGIDVVVPYFISALETILPDRELSKFKSYVNPTELRRSSINILLSLLPL
PHHFGTVKSEVVLEGKFSNDDSSSYDKPITFLSLKLRLVNILIGALQTETDPNNTQMI
LGAMLNIVQDSALLEAIGCQMEMGGGENNLKSHSRTNSGISSASGGSTEPTTPDSERP
AQALLRDYALNTDSAAGLLIRSIHLVTQRLNSQWRQDMSISLAALELLSGLAKVKVMV
DSGDRKRAISSVCTYIVYQCSRPAPLHSRDLHSMIVAAFQCLCVWLTEHPDMLDEKDC
LKEVLEIVELGISGSKSKNNEQEVKYKGDKEPNPASMRVKDAAEATLTCIMQLLGAFP
SPSGPASPCSLVNETTLIKYSRLPTINKHSFRYFVLDNSVILAMLEQPLGNEQNDFFP
SVTVLVRGMSGRLAWAQQLCLLPRGAKANQKLFVPEPRPVPKNDVGFKYSVKHRPFPE
EVDKIPFVKADLSIPDLHEIVTEELEERHEKLRSGMAQQIAYEIHLEQQSEEELQKRS
FPDPVTDCKPPPPAQEFQTARLFLSHFGFLSLEALKEPANSRLPPHLIALDSTIPGFF
DDIGYLDLLPCRPFDTVFIFYMKPGQKTNQEILKNVESSRTVQPHFLEFLLSLGWSVD
VGRHPGWTGHVSTSWSINCCDDGEGSQQEVISSEDIGASIFNGQKKVLYYADALTEIA
FVVPSPVESLTDSLESNISDQDSDSNMDLMPGILKQPSLTLELFPNHTDNLNSSQRLS
PSSRMRKLPQGRPVPPLGPETRVSVVWVERYDDIENFPLSELMTEISTGVETTANSST
SLRSTTLEKEVPVIFIHPLNTGLFRIKIQGATGKFNMVIPLVDGMIVSRRALGFLVRQ
TVINICRRKRLESDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQEVGLKNCSS
"
BASE COUNT 1313 a 1101 c 1128 g 1316 t
ORIGIN
1 agtcggaagt tgcctgagca gatcccagcc ggctggctcg agtggccttc gtcgtccctt
61 ggcgccctgg gagagtcgct gacgggtgga ctgacggacc gcctgaggac ggccggccag
121 ggcggtgaaa gcgccagccc tatggcgcgg gtcgcgtgag gcggaaggcc gaggacggcc
181 ggcggcggcg cccgccccgg cgatgcgggc cccgcccgtc gcctcaggtg ccatttggat
241 tgtactttag tggcacgatg tactctgagt ggaggtcact gcatttggtg attcagaatg
301 atcaaggcca taccagtgtg ctgcacagct atccagagag cgttggacga gaggtggcaa
361 atgctgtagt ccgtcctctt gggcaggtgt taggtacccc ttcagtggct ggtagtgaga
421 atttgttaaa aactgacaaa gaagtaaaat ggaccatgga agtaatttgc tatggactga
481 cccttccatt ggatggagag actgtaaaat attgcgttga tgtatataca gactggatta
541 tggctttagt gttgccaaaa gattctattc cattgccagt tattaaagag cctaatcaat
601 atgttcaaac tatactaaaa cacctacaga atctttttgt accaagacag gaacagggtt
661 ccagtcagat tcgactatgc ttacaggtcc tgagagccat tcagaaactg gcccgtgagt
721 catctctcat ggcccgagaa acttgggaag tcttactgtt gtttcttctg cagattaacg
781 acatacttct ggccccacca actgttcaag gtggcattgc tgagaatcta gcagagaagt
841 tgattggtgt tctctttgag gtgtggttac tagcttgtac tcggtgcttc ccaacacctc
901 cttattggaa aacagccaag gagatggtgg ctaactggag gcatcaccca gcagtggtgg
961 agcagtggag caaggtcatt tgtgcactca cttccagatt gctacgcttt acatatggtc
1021 cttcatttcc tgcatttaaa gttcccgatg aagatgccag tctgatccct ccagaaatgg
1081 ataatgagtg tgttgcacag acgtggtttc gctttttaca catgttaagt aatcctgtgg
1141 atttgagtaa cccagctatt ataagctcta ctcccaaatt tcaggaacag ttcttgaatg
1201 tgagcggaat gccgcaagaa ttgaatcagt atccctgcct taaacatctg cctcaaatat
1261 tttttcgtgc catgcgtgga atcagctgtc tggtggatgc attcttaggt atttctagac
1321 cccgatcaga cagtgctccc ccaacacccg tgaatagatt aagtatgcct caaagtgctg
1381 ctgtcagtac caccccccca cataaccgga ggcaccgggc tgttactgtg aataaggcca
1441 ccatgaagac aagcacagtt agtactgctc atgcctctaa agttcagcac cagacgtcct
1501 ccacctctcc tctgtcaagt ccaaatcaga ctagttcaga accccggcca ctgcctgccc
1561 ctcggagacc aaaggttaac agcatcttga atctctttgg atcatggtta tttgatgcag
1621 catttgttca ctgtaaactt cataatggga taaacagaga cagcagcatg actgccatta
1681 caacacaagc tagcatggag tttcgacgga aagggtcaca aatgtccaca gacaccatgg
1741 tttccaatcc tatgtttgat gcaagtgaat ttcctgataa ctatgaagca ggaagagctg
1801 aggcttgtgg gacactgtgt aggatttttt gtagcaagaa gactggagaa gagattctgc
1861 cagcttattt atccagattt tacatgcttt taattcaagg tttgcagata aatgattatg
1921 tgtgccatcc tgtcttggcc agcgttattc taaactctcc tcctttgttc tgctgtgact
1981 tgaaagggat tgatgttgtg gttccttact ttatttcagc tcttgaaacc attttgcctg
2041 acagagaact ctcaaaattc aaaagctatg taaatccaac agaattgcga agatcctcca
2101 ttaatatcct gctttctttg ttgcccctcc ctcatcattt tggcacagtc aaatctgagg
2161 tggtcctgga aggaaagttt agtaacgatg acagctcttc ttatgataaa ccaataactt
2221 ttctgtccct gaagttgaga cttgtgaata tattaatagg tgccttgcaa actgaaacgg
2281 accccaacaa cacccaaatg atattagggg caatgttaaa tattgttcaa gattcagcac
2341 ttttggaagc cattggttgc cagatggaga tgggtggtgg agaaaataac ctgaagagtc
2401 atagtcgcac caatagtggt attagttcag caagtggtgg aagcacggag cccacgactc
2461 ccgatagtga gagacctgct caagctctct taagagatta tgctcttaat acagattcag
2521 ctgctgggct cctgattcgc agcattcatc tcgtcaccca aagactcaac tcccagtggc
2581 gccaagacat gagcatatca ctggcagctc tggagctcct ctctggcctt gcaaaggtaa
2641 aagtgatggt tgactcagga gaccggaagc gagccatcag ttctgtgtgc acctacattg
2701 tttatcagtg tagtcggcca gctcctttac actccaggga tctgcactcc atgatagtgg
2761 cagcttttca gtgtctctgt gtctggctga cagagcaccc tgatatgctt gatgaaaagg
2821 actgccttaa ggaagtactg gagattgtgg aactgggtat ctcaggaagt aagtccaaga
2881 acaatgagca agaggtcaag tacaaaggag ataaggagcc aaaccctgca tctatgaggg
2941 taaaggatgc tgctgaagcc accctaacat gcattatgca gttgctcggc gcatttcctt
3001 cacctagtgg tcctgcctct ccttgtagtc ttgtgaatga gaccactttg attaaatact
3061 ccaggctgcc aaccataaac aagcatagtt tccggtactt tgtcttggat aacagtgtca
3121 tcctggcaat gctggaacaa cctcttggaa atgagcagaa tgattttttc ccctctgtca
3181 ctgtgctggt ccggggaatg tctggaagac ttgcttgggc acaacagctt tgtcttttac
3241 ccagaggagc aaaagcaaat cagaagcttt ttgtacctga acctcgccca gttcctaaaa
3301 atgacgttgg atttaaatat tctgtgaaac atcggccatt tcctgaagag gtggacaaga
3361 ttccttttgt gaaagcagat ctcagcattc cagatttgca tgaaatagtc actgaagaat
3421 tagaagagag acacgaaaaa ttaaggagtg gcatggccca gcagattgct tatgaaatac
3481 accttgagca acagagtgag gaggaattgc agaagagaag ttttcctgac ccagttacgg
3541 attgcaagcc cccgcctcct gcccaggaat tccaaacagc ccgccttttt ctctcacact
3601 ttggattttt gtccttagaa gcactgaagg aacctgcaaa tagtcgtcta cctcctcacc
3661 ttattgcact tgattccacg atacctggat tttttgatga cattgggtat ctggatctct
3721 tgccatgtcg tccttttgac acagttttta ttttctatat gaagccaggt cagaaaacga
3781 accaagagat tttaaagaat gtggagtctt ccagaactgt tcagccacat ttcctagaat
3841 ttttgctttc ccttggctgg tcagtagatg tgggcagaca ccctggttgg actgggcatg
3901 tttctaccag ttggtctatt aattgttgtg atgatggtga aggatctcaa caagaagtga
3961 tttcctctga agatattgga gctagcattt tcaatggaca gaagaaggtg ctgtattatg
4021 ctgatgccct tacagaaatt gcttttgtgg ttccttctcc tgtggagtcc ttaactgatt
4081 cattggaaag taacatctcg gaccaagata gtgattcaaa tatggatctt atgccaggaa
4141 ttctgaaaca gccatccctg acacttgagc ttttccccaa tcatacagac aatcttaatt
4201 cctcacagag gctcagtccc agttccagaa tgaggaagct gcctcagggt cgccctgttc
4261 ctccccttgg acctgagaca agagtttctg tagtctgggt ggaacgctat gatgatatag
4321 aaaactttcc cctctcagag ctgatgacag agatcagtac tggtgtggaa actactgcaa
4381 atagtagcac ttcactgaga tctacaactc ttgaaaaaga agttcctgtc atcttcatcc
4441 accctttaaa cactggatta ttccggataa aaattcaagg agccactgga aaatttaata
4501 tggtcatccc tcttgtggat gggatgattg tcagcaggcg agctcttggc tttctggtga
4561 ggcagactgt aattaacatt tgtagaagaa agagactgga aagtgactcc tacagtcccc
4621 cccatgtccg ccggaaacag aaaatcaccg acattgtcaa caagtaccgg aacaagcagc
4681 tggagccaga gttttatact tcacttttcc aggaggttgg actcaagaac tgcagttctt
4741 agaccactga atttctaaga ctgttgaact ccagtttggg aactataaca cagcagaaca
4801 gtttgatagg tgatcactgt aaaaataaaa acaaatcact ccaaaaaaaa aaaaaaaa
//