LOCUS BC047452 2528 bp mRNA linear HTC 26-JUN-2007
DEFINITION Homo sapiens ATPase, Class I, type 8B family pseudogene, mRNA (cDNA
clone IMAGE:5297817), with apparent retained intron.
ACCESSION BC047452
VERSION BC047452.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2528)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2528)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: j Column: 7
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2528
/db_xref="H-InvDB:HIT000098595"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5297817"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 783 a 462 c 523 g 760 t
ORIGIN
1 gggtctctag ggcgtctgcg caggaaggtg cgttgagatg gcagttgccg gagttggagg
61 ccgggcggcg acgaaattcc atggaattat agttggtcta ctctgcaatg tctctattta
121 aaagcccaag tgaggacaga caagatgaac gtagaacatg agagatatct gcaagccaac
181 aacaaagaat tcaacagtat ttttggatat ccgaacaatg ccatcaagac ctcaaaatat
241 agtgtcttta atttcctgcc cctgaaccta tttgaacagt tccagagact tgcaaatgca
301 tatttcctca ttttgctatt tttacagttg attccccaga tctcctcctt gacatggtat
361 acaactataa cacccctgat ggtggtgctg tccattaaca gctgtgaaag atgccatcga
421 tgacctgaaa aggcatcaaa gtgacgatcg agtcaacaac cagcctgttc tgctactggt
481 gaatggcaag ataaaggagg acaaatggat gaatgttcaa gtgggagata taataaaact
541 agaaaataat cagcctgtca tggcagatat actattactc tctagcagtg agccatatag
601 tctgacatac atagagacag cagacctgga tggtgaaacc aacctgaaag tgaagcaggc
661 catctcagtt accagtgaca tggaagatcg cctggagctt ctgtctacct ttaatggaga
721 agtgagatgt gaggctccca ataacaaatt ggacaaattc tcaggaatac tgacctataa
781 ggggaaaaac tacttcctgg accatgacaa gctgctactc tgaggctgca acatcaggaa
841 tacagattgg tgctatggct tggtgatcta cactgggcca gataccaaat taatgcagaa
901 tagtggaaag tccactttta aacgaacaca gatagaccat ctcatgaatg tccttgtact
961 ctgggtaagt taaatacttt tttttctttg tttctttaca aatagacata cttcccttcc
1021 tttcacagga gaaatggtat ttccagttca gaatttagct gtttgaaagt ctcaagcaca
1081 gcttcaagtg aagttaatct gaggtgaagc aaacagaaaa ttgtggaggt tttgttggtg
1141 tgcaatggag gaacatggct caagaaacta atcacagcca agtacctatg ctttgttcca
1201 ctggctgcgg attttatgga aaccctcgta caaatggcac gtgttcagta tgctataaag
1261 aacatcttca aagactgaat agtagtaatg gtagaataag ccaacctgca acctctgaat
1321 ctttaccagt tcaatgcaca gatggcagtg tcccagaagc ccagtcaaca ttagactcta
1381 catcttcatc tatgcagcca agccctgtat caaatcagtc acttttatca gaatctgtag
1441 catcttctca attggacagt acatctgtgg acaagcagta cctgaaacag aagatctgca
1501 ggcttcagta tcagacatgg cacagcagcc atctgaagag caaagcaagt ctcttgaaaa
1561 accaaaacaa aaaaagaatc tctgtttcat gtgcaggaag aaagtgggac ttactaggtt
1621 tgaatgcggt gtagaaatgt ttactgtggt gtacactgtt actcagatct acacaattgc
1681 tcttaaaatt acaaagctga tgccgctgag aaaatcagaa aagaaaatcc agtagttgtt
1741 ggcgagaaga tccaaaagat ttgaactcct gctggaatac aaaattcttg atcatctgca
1801 aactaaaaat tgacttgagg tttttttttc cctagtcatt gggaaagtag agcagtgtat
1861 cttgcatgtc atcggatgaa tagatttttg ttttgatttt gttttgaaaa tgactctgaa
1921 catttatttc cattgcaatt tctgtggctg agaagactta aactttacaa gtattatcct
1981 tataagatca ttttaatttt agttgagtgc agagggcttt tataacaaac gtgcagaaat
2041 tttggtggac tgtgattttt ccagtattaa atatgcatgc attaatcttg cagtttattt
2101 tctcattgtg tacatatata ttgcttttct ttgcagcacg atttctcttt tgataatgcc
2161 ctttggggca caactagtta tcggtaactg aatgtatctt aatcattatg gctgcttctg
2221 ttttttcatt aacaaaggtt attcatatgt tagcatatag tttctttgca cccactattt
2281 atgtctgaat catttgtcac gagagtgtgt gctgatgaga ttctaagttt gtgtgtttaa
2341 actttttttt gagcgaggga agaaaaagct gtatgcattt cattgctgtc tacaggtttc
2401 tttcagatta tgttcatggg tttgtgtgta tacgatatga agaatgatct gaagtaattg
2461 tgctgtattt atgtttattc accagtcttt gattaaataa aaaggaaaac cagaaaaaaa
2521 aaaaaaaa
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