LOCUS BC047409 2164 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens karyopherin alpha 5 (importin alpha 6), mRNA (cDNA clone MGC:51011 IMAGE:5297277), complete cds. ACCESSION BC047409 VERSION BC047409.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2164) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2164) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 91 Row: j Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39812228. FEATURES Location/Qualifiers source 1..2164 /db_xref="H-InvDB:HIT000053125" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:51011 IMAGE:5297277" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2164 /gene="KPNA5" /gene_synonym="IPOA6" /gene_synonym="SRP6" /db_xref="GeneID:3841" /db_xref="HGNC:HGNC:6398" /db_xref="MIM:604545" CDS 124..1743 /gene="KPNA5" /gene_synonym="IPOA6" /gene_synonym="SRP6" /codon_start=1 /product="karyopherin alpha 5 (importin alpha 6)" /protein_id="AAH47409.1" /db_xref="GeneID:3841" /db_xref="HGNC:HGNC:6398" /db_xref="MIM:604545" /translation="MDAMASPGKDNYRMKSYKNKALNPQEMRRRREEEGIQLRKQKRE EQLFKRRNVYLPRNDESMLESPIQDPDISSTVPIPEEEVVTTDMVQMIFSNNADQQLT ATQKFRKLLSKEPNPPIDQVIQKPGVVQRFVKFLERNENCTLQFEAAWALTNIASGTF LHTKVVIETGAVPIFIKLLNSEHEDVQEQAVWALGNIAGDNAECRDFVLNCEILPPLL ELLTNSNRLTTTRNAVWALSNLCRGKNPPPNFSKVSPCLNVLSRLLFSSDPDVLADVC WALSYLSDGPNDKIQAVIDSGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQV ILNCSALPCLLHLLSSPKESIRKEACWTVSNITAGNRAQIQAVIDANIFPVLIEILQK AEFRTRKEAAWAITNATSGGTPEQIRYLVALGCIKPLCDLLTVMDSKIVQVALNGLEN ILRLGEQESKQNGIGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVE EDDPSIVPQVDENQQQFIFQQQEAPMDGFQL" BASE COUNT 735 a 380 c 453 g 596 t ORIGIN 1 atctgggatt gcgaactggg tcgctacgct tcacgccagg gcggagtggc ggcccttctg 61 ttacccgcca cacacgtcgc cgctggggac tgggaaatca gggcatcgga gagtgccaca 121 ttaatggatg ccatggctag tccagggaaa gataactata gaatgaaaag ttataagaat 181 aaagccctaa atcctcaaga gatgcgtaga cgaagagaag aagaaggaat acagcttaga 241 aaacaaaaaa gagaagaaca gttgttcaaa cgcagaaatg tctatttgcc cagaaatgat 301 gaatctatgc ttgaaagtcc tatacaggat ccagatatta gttccactgt acccattcca 361 gaggaagaag ttgttactac agatatggtt cagatgattt tttctaataa tgctgatcaa 421 cagctaacag caacacagaa atttagaaag ctgctttcta aagaacctaa tccaccaata 481 gatcaagtta tacagaaacc aggagttgta cagagatttg tgaaatttct tgaaagaaat 541 gaaaattgca ctttacaatt tgaagctgca tgggcattaa caaatatagc atctggaact 601 tttctgcata ccaaggtagt gattgaaact ggggctgttc cgatttttat caaacttctt 661 aattctgaac atgaagatgt tcaggaacag gctgtttggg cacttggtaa tattgctggt 721 gacaatgcag aatgcagaga ttttgttttg aattgtgaaa tacttccacc tcttttagag 781 ttattaacaa attcaaacag actcacaaca acaagaaatg ccgtgtgggc cctctcaaat 841 ttatgtagag gcaaaaaccc tcctccaaac tttagtaagg tttcaccttg cttaaatgtc 901 ctgtcacgac tgttgtttag cagtgaccca gatgtgttag cagacgtgtg ttgggccctt 961 tcttatctct ccgatggacc caatgataaa attcaagcag tcattgattc tggagtctgt 1021 cgaagattgg tggaactttt gatgcacaat gattataaag ttgtatcacc tgcattaagg 1081 gcagttggta atattgtgac tggtgatgat attcaaacac aggtaatttt gaattgttct 1141 gcattaccct gtctcttaca tttattgagt agcccaaagg agtcaattag aaaagaagcc 1201 tgctggactg tttctaacat cactgctgga aatagagctc agattcaggc tgttatagat 1261 gcaaatattt ttcctgtttt gattgagatt cttcagaaag cagagtttcg taccagaaaa 1321 gaagcagctt gggctataac taatgcaaca tcaggaggta ctccagagca aataaggtat 1381 ttggtagctt taggctgcat taaaccactt tgtgatcttt tgactgttat ggactccaaa 1441 atagtccaag tggctttaaa tggacttgaa aatattttac gtcttggaga acaagaatct 1501 aagcagaatg gaataggcat taatccatac tgtgctctca ttgaagaagc atatggtctg 1561 gataaaattg agtttttgca aagccatgaa aatcaggaaa tttaccagaa ggcatttgat 1621 ctgattgaac attactttgg tgtagaagaa gatgacccca gcattgtacc tcaggtggat 1681 gaaaaccaac aacagtttat atttcagcag caggaagcac caatggatgg atttcaactt 1741 taacttactg gaggaaaaaa aatttatggc taaaaagggt agcttcagaa atgacagact 1801 ttttcattga atgatgagga cacagcagcc atattatgcc aagaggaaaa atatcatgat 1861 catattgaaa gatcaagcat gagcttccat ggtgaagtct tctgtaccaa tgcaccagag 1921 aatgcctacc atccaaaaaa gcagtcagct gatggaaaag aagattatta aacctttgtt 1981 ctgggattta ctgttaaaaa acaaacaaaa aacaacaaaa aagcggtgac aggaaacagt 2041 taaggaaatg atttaactga agggaagcaa gattttttta aagcattgtt cttaatcccc 2101 atgactgtcc ttcagtcaca attccagaat aaaagaatct actttgtgta aaaaaaaaaa 2161 aaaa //