LOCUS BC047379 2167 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens protein phosphatase 2, regulatory subunit B, delta
isoform, mRNA (cDNA clone MGC:51327 IMAGE:5267510), complete cds.
ACCESSION BC047379
VERSION BC047379.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2167)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2167)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51093852.
FEATURES Location/Qualifiers
source 1..2167
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51327 IMAGE:5267510"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2167
/gene="PPP2R2D"
/gene_synonym="MDS026"
/db_xref="GeneID:55844"
/db_xref="HGNC:HGNC:23732"
CDS 506..1867
/gene="PPP2R2D"
/gene_synonym="MDS026"
/codon_start=1
/product="protein phosphatase 2, regulatory subunit B,
delta isoform"
/protein_id="AAH47379.1"
/db_xref="GeneID:55844"
/db_xref="HGNC:HGNC:23732"
/translation="MAGAGGGGCPAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNY
SGDLLATGDKGGRVVIFQREQENKSRPHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKI
NKIRWLPQQNAAHFLLSTNDKTIKLWKISERDKRAEGYNLKDEDGRLRDPFRITALRV
PILKPMDLMVEASPRRIFANAHTYHINSISVNSDHETYLSADDLRINLWHLEITDRSF
NIVDIKPANMEELTEVITAAEFHPHQCNVFVYSSSKGTIRLCDMRSSALCDRHSKFFE
EPEDPSSRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMESRPVETHQVHEY
LRSKLCSLYENDCIFDKFECCWNGSDSAIMTGSYNNFFRMFDRDTRRDVTLEASRESS
KPRASLKPRKVCTGGKRRKDEISVDSLDFNKKILHTAWHPVDNVIAVAATNNLYIFQD
KIN"
BASE COUNT 539 a 581 c 622 g 425 t
ORIGIN
1 gtgtccggcc aagcggcgcc ctgaaggcgt gtccggccgc agcttaggct ctccgggagt
61 ccccggagag taggggcggc cggcggcgct agtcttctgg ggagcgccgg gtgcacaccg
121 gaccactgcg ggaggcctag ggccgagggc cgaggagctg gcctgcgccc ggcgaccccg
181 gcttccctcc gcagtcgccc aggcgtccct tcccccctac agccgagcgg cgccgggcgc
241 aggcgcattg ggcgcccccg gcagcccccg cggcccgccc cgtccgctgc ccgtccgagg
301 aggcggaggg cgatgacgtc atcgagcggg gcgacgggca ttgggcgcca ttttgaaaag
361 ggaaaaaaat ccctccccgg cggcggcggc ggcggcggcg gcgccggcgg tggtggcggc
421 cccggggctg agcgctcggc tgcagcggcg cggaggccgt ctccctggtc tgccgcggtc
481 cccgcccgtc ccgccgccgg ctgccatggc aggagccgga ggcggcggct gccccgcggg
541 cggcaacgac ttccagtggt gcttctcgca ggtcaagggg gccatcgacg aggacgtggc
601 cgaagcggac atcatttcca ccgttgagtt taattactct ggagatcttc ttgcaacagg
661 agacaagggc ggcagagttg ttatttttca gcgtgaacaa gagaataaaa gccgccctca
721 ttctagggga gaatataatg tttacagcac ctttcaaagt catgaaccgg agtttgacta
781 tttgaaaagt ctagaaattg aggaaaaaat taataaaatt aggtggttac cacaacagaa
841 tgctgctcat tttctactgt ctacaaatga taaaactata aaattatgga aaataagtga
901 acgggataaa agagcagaag gttataacct gaaagacgaa gatggaagac ttcgagaccc
961 atttaggatc acggcgctac gggtcccaat attgaagccc atggatctta tggtagaagc
1021 gagtccacgg cgaatttttg caaatgctca cacatatcat ataaattcca tttcagtaaa
1081 tagtgatcat gaaacatatc tttctgcaga tgacctgaga attaatttat ggcacttaga
1141 aatcacagat agaagcttta acatcgtgga catcaagcct gctaacatgg aggagctgac
1201 cgaagtcatc actgcagccg agttccaccc gcaccagtgc aacgtgttcg tctacagcag
1261 tagcaaaggg accatccgcc tgtgtgacat gcgctcctcg gccctgtgcg acagacactc
1321 caagtttttt gaagagcctg aagatcccag cagtaggtcc ttcttctcag aaataatttc
1381 atccatatcc gatgtaaaat tcagtcatag tgggcggtac atgatgacca gagactacct
1441 gtcggtgaag gtgtgggacc tcaacatgga gagcaggccg gtggagaccc accaggtcca
1501 cgagtacctg cgcagcaagc tctgctctct ctatgagaac gactgcatct ttgacaagtt
1561 tgagtgttgc tggaacggtt cggatagcgc catcatgacc gggtcctata acaacttctt
1621 caggatgttt gatagagaca cgcggaggga tgtgaccctg gaggcctcga gagagagcag
1681 caaaccgcgc gccagcctca aaccccggaa ggtgtgtacg gggggtaagc ggaggaaaga
1741 cgagatcagt gtggacagtc tggacttcaa caagaagatc ctgcacacag cctggcaccc
1801 cgtggacaat gtcattgccg tggctgccac caataacttg tacatattcc aggacaaaat
1861 caactagaga cgcgaacgtg acgaccaagt cttgtcttgc atagttaagc cggacatttt
1921 tctgtcagag aaaaggcatc attgtccgct ccattaagaa cagtgacgca cctgctactt
1981 cccttcacag acacaggaga aagccgcctc cgctggaggc ccggtgtggt tccgcctcgg
2041 cgaggcgcga gacaggcgct gctgctcacg tggagacgct ctcgaagcag agttgacgga
2101 cactgctccc aaaaggtcat tactcagaat aaatgtattt atttcagtcc gaaaaaaaaa
2161 aaaaaaa
//