LOCUS BC047333 1180 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens spermatogenesis associated 9, mRNA (cDNA clone MGC:51802 IMAGE:5166271), complete cds. ACCESSION BC047333 VERSION BC047333.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1180) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1180) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 93 Row: f Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50659063. FEATURES Location/Qualifiers source 1..1180 /db_xref="H-InvDB:HIT000053114" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:51802 IMAGE:5166271" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1180 /gene="SPATA9" /gene_synonym="FLJ35906" /gene_synonym="NYD-SP16" /db_xref="GeneID:83890" /db_xref="HGNC:HGNC:22988" /db_xref="MIM:608039" CDS 143..907 /gene="SPATA9" /gene_synonym="FLJ35906" /gene_synonym="NYD-SP16" /codon_start=1 /product="spermatogenesis associated 9" /protein_id="AAH47333.1" /db_xref="GeneID:83890" /db_xref="HGNC:HGNC:22988" /db_xref="MIM:608039" /translation="MPIKPVGWICGQVLKNFSGRIEGIQKAIMDLVDEFKDEFPTILR LSQSNQKREPAQKTSKIRMAIALAKINRATLIRGLNSISRSSKSVAKLLHPQLACRLL ELRDISGRLLREVNAPRQPLYNIQVRKGSLFEIISFPAKTALTSIIYASYAALIYLAV CVNAVLKKVKNIFQEEESIRQNREESENCRKAFSEPVLSEPMFAEGEIKAKPYRSLPE KPDISDYPKLLANKQSNNIQVLHSVFDQSAEMNEQI" BASE COUNT 437 a 213 c 230 g 300 t ORIGIN 1 ccagcagtga gctgtgagtt ctgtccttgc tggctttccc aagtggaagg ctaccctcat 61 ctttcactaa tggcagacta ggacaagcat tacccaggcc tgcaagcttg ttaaggacta 121 ggaacccaag caagaactca ccatgccaat caaacctgtt gggtggatat gtgggcaggt 181 gttgaagaac ttttctggaa gaatcgaggg gatccagaaa gcaatcatgg accttgtaga 241 tgagtttaaa gatgaatttc ccaccatcct aagattatca cagtctaatc agaaaagaga 301 acctgcgcag aaaacatcca aaatcaggat ggctattgct ttagctaaga ttaatcgagc 361 aacattaatt cgtggattaa acagcatatc cagatcctcc aaatcagtgg ccaaacttct 421 gcatcctcag cttgcatgca gacttttaga gctaagggac atatctggtc gtctgctgag 481 ggaagttaat gcgccgaggc aacccctata taacattcag gtcagaaagg gttctttgtt 541 tgaaatcatc tcctttccag caaagactgc tttaactagc ataatatatg cttcatatgc 601 agcactaatt tatttggcag tctgtgttaa tgctgtgctg aagaaggtaa agaacatctt 661 ccaggaagaa gaatccataa ggcaaaacag agaggagagt gaaaattgta gaaaagcctt 721 ttctgagcct gtgctttcgg agcctatgtt tgctgaaggt gaaatcaaag caaaacctta 781 taggtcattg ccggagaagc cagacatttc agattacccc aagcttcttg ctaataagca 841 gagtaataac atccaagttt tacattctgt gtttgaccaa tcagctgaaa tgaatgagca 901 aatctgaata caggtatcac tgaacagaac ttaagagtta tctatttaat ggcacatttc 961 atctgacaaa actcagagtc tagtttacat attctgaatt gctctgcttt cttaaaaaaa 1021 agagaagggg gctactatta aaatgtcatt ttctagtatt tacatgatag agtaaataaa 1081 atgaatattg atgtggaata aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //