LOCUS BC047317 4084 bp mRNA linear HTC 28-JUL-2005
DEFINITION Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
(CHL1-like helicase homolog, S. cerevisiae), mRNA (cDNA clone
IMAGE:5216292), with apparent retained intron.
ACCESSION BC047317
VERSION BC047317.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4084)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4084)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: k Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21536327
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4084
/db_xref="H-InvDB:HIT000098518"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5216292"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 935 a 1095 c 1217 g 837 t
ORIGIN
1 cgccagtttc taactcagtg gcgtttgccc tgattcccgg ggcctggctt tcagcgtagc
61 aattctgccg gcgaagaagg tgagcgcagt gctgtgtggc agcagagctc cttaggacga
121 ggagcagcgg gacgaggaag ggcagactgg tgaaatcgca aactgggcgt ctgttccggc
181 gccggacccc tatttgcaaa ggtccatggc taatgaaaca cagaaggttg gtgccatcca
241 ttttcctttt cccttcacac cctattccat ccaggaagac ttcatggcag agctgtaccg
301 ggttttggag gctggcaaga ttgggatatt tgagagtcca actggcactg ggaagtcctt
361 aagtcttatt tgtggggccc tctcttggct ccgtgacttt gaacagaaga agcgtgaaga
421 agaggcacga ctccttgaaa ctggaactgg ccccttacat gatgagaaag atgaatccct
481 gtgtctgtct tcttcctgcg aaggggctgc aggcaccccg aggcctgctg gagaaccggc
541 ctgggttact cagtttgtgc agaagaaaga agagagggac ctggtggacc gactaaaggc
601 ggagcaggcc aggaggaagc agcgagaaga acgcctgcag cagctgcagc acagggtgca
661 gctcaagtat gcagccaagc gcctgaggca ggaagaagaa gaaagagaga atctcctccg
721 cctcagcagg gagatgctag agacaggccc ggaggctgag cggctggagc agctggagtc
781 tggggaggag gagctggtcc tcgccgaata cgagagtgat gaggagaaaa aggtggcgag
841 cagagtggat gaggatgagg atgacctgga ggaagaacac ataactaaga tttattactg
901 tagtcggaca cactcccagc tggcccagtt tgtgcatgag gtgaagaaga gcccctttgg
961 caaggatgtt cggctggtct cccttggctc ccggcagaac ctttgtgtaa atgaagacgt
1021 gaaaagccta ggttctgtgc agcttatcaa cgaccgctgt gtggacatgc agagaagcag
1081 gcacggtagc cactgggacc atggtgtagc cgcaggtggt ctggagagag tgaggcaggg
1141 gtggcagtga ctgaagacca ttaagtgtct ttcatagaaa gaatggcaga ggagacccca
1201 gttccttcct gagtcccctc tccttgggaa aaagtgttcc tactctctgg gtcagtgtct
1261 ggtccgaatc cttggcttgg agatgatttt acgggctctt tctggagaac agaagtaaaa
1321 ccttacagtg ttccgatgag accacagtag gcagtacttg ggagggtctt atagacccta
1381 ccccatggaa gtgggtctca acattacaca accccctctt gggcccgtgg acagttgctg
1441 tcctctctgt tttctctctt tgtgcctgtg ccaccctcag agaagaagaa aggagctgag
1501 gaggagaagc caaagaggag gaggcaggag aagcaggcag cctgcccctt ctacaaccac
1561 gagcagatgg gccttctccg ggatgaggcc ctggcagagg tgaaggacat ggagcagctg
1621 ctggcccttg ggaaggaggc ccgggcctgt ccctattacg ggagccgcct tgccatccct
1681 gcagcccagc tggtggtgct gccctatcag atgctgctgc atgcggccac tcggcaggcc
1741 gcgggcatcc ggctgcagga ccaggtggtg atcatcgacg aggcgcacaa cctgatcgac
1801 accatcacgg gcatgcacag cgtggaggtc agcggctccc agctctgcca ggcccattcc
1861 cagctgctgc agtacgtgga gcgatacggg aagcgtttga aggccaagaa cctgatgtac
1921 ctgaagcaga tcctgtattt gctggagaaa ttcgtggctg tgctaggggg gaacattaag
1981 caaaatccca atacacagag tctgtcacag acagggacgg agctgaagac catcaacgac
2041 tttctcttcc agagccagat cgacaacatc aacctgttca aggtgcagcg atactgtgag
2101 aagagcatga tcagcagaaa gctctttgga ttcactgaac ggtacggagc agtgttctca
2161 tcccgggagc agcccaaact ggctgggttt cagcaattcc tgcagagcct gcagcccagg
2221 acgactgaag ctcttgcagc ccctgcagac gagagtcagg ccagcaccct gcgaccagct
2281 tctccactga tgcacatcca aggcttcctg gcagctctca ctacggccaa ccaggacggc
2341 agggtcatcc tgagccgcca aggcagcctc agtcagagca ccctgaagtt tttgctcctg
2401 aatccagctg tgcactttgc ccaagtggtg aaggaatgcc gggcagtggt cattgcgggg
2461 ggtaccatgc agccggtgtc tgacttccgg cagcagctgc tggcctgtgc cggggtggaa
2521 gctgagcgcg tggtggagtt ttcctgtgac aacatcctgc ccctcgtcat ctgcagcggg
2581 atctccaacc agccgctgga attcacgttc cagaaaagag agctgcctca gatgatggac
2641 gaggtgggtc gcattctctg taacctgtgc ggtgtggttc ctggaggggt ggtctgtttc
2701 ttcccctcct acgagtacct gcgccaggtc catgcccact gggagaaggg tggcctgctg
2761 ggccgtctgg ctgccaggaa gaagatattc caggaaccta agagcgcaca ccaggtggag
2821 caggtgctgc tggcatattc caggtgcatc caggcctgtg gccaggagag aggccaggtg
2881 acaggggccc tgctcctctc tgtggttgga ggaaagatga gtgaagggat caacttctct
2941 gacaacctag gccggtgtgt ggtgatggtg ggcatgccct tccccaacat caggtctgca
3001 gagctgcagg agaagatggc ctacttggat caaaccctcc ccagagcccc cggccaggca
3061 cccccaggga aggctctggt ggagaacctg tgcatgaagg ccgtcaacca gtccataggc
3121 agggccatca ggcaccagaa ggattttgcc agcgtagtgc tcctggacca gcgatatgcc
3181 cggccccctg tcctggccaa gctgccggcc tggatccgag cccgtgtgga ggtcaaagct
3241 acctttggcc ccgccattgc tgctgtgcag aagtttcacc gggagaagtc ggcctcttcc
3301 tgatgggcaa ccacaccact gcctggcgcc gtgcccttcc tttgtcctgc ccgctggaga
3361 cagtgtttgt cgtgggcgtg gtctgcgggg atcctgttac aaaggtgaaa cccaggagga
3421 gagtgtggag tccagagtgc tgccaggacc caggcacagg cgttagctcc cgtaggagaa
3481 aatgggggaa tcctgaatga acagtgggtc ctggctgtcc ttggggcgtt ccagggcagc
3541 tcccctcctg gaatagaatc tttctttcca tcctgcatgg ctgagagcca ggcttccttc
3601 ctgagtcact ccttcagtag aaggccctgc tccctatcct gtcccacagc cctgcctgga
3661 tttgtatcct tggcttcgtg ccagttcctc caagtctatg gcacctccct ccctctcaac
3721 cacttgagca aactccaaga caccttctac cccaacacca gcaattatgc caagggccgt
3781 taggctctca acatgactat agagaccccg tgtcatcacg gagacctttg ttcctgtggg
3841 aaaatatccc tcccacctgc aacagctgcc cctgctgact gcgcctgtct tctccctctg
3901 accccagaga aaggggctgt ggtcagctgg gatcttctgc caccatcagg gacaaacggg
3961 ggcaggagga aagtcactga tgcccagatg tttgcatcct gcacagctat aggtccttaa
4021 ataaaagtgt gctgttggtt tctgctgaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4081 aaaa
//