LOCUS BC047299 3203 bp mRNA linear HTC 01-FEB-2005
DEFINITION Homo sapiens zinc finger protein interacting with K protein 1, mRNA
(cDNA clone IMAGE:4442601), with apparent retained intron.
ACCESSION BC047299
VERSION BC047299.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3203)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3203)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: c Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3203
/db_xref="H-InvDB:HIT000098505"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4442601"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 857 a 641 c 683 g 1022 t
ORIGIN
1 gtgcagcgaa tgtggaaaat tatttagaca aaactccagc cttgttgacc accagaaaat
61 acacactgga gcaaggcctt atgagtgtag ccagtgtggg aaatccttta gccaaaaagc
121 cacccttgtt aaacaccaaa gagttcacac tggagaaagg ccttataagt gtggtgaatg
181 tgggaattcc tttagtcaaa gtgccattct taatcaacac cgaagaattc acactggagc
241 aaagccttat gagtgtggcc agtgtgggaa atcctttagt caaaaagcta ccctcattaa
301 acaccagaga gttcacactg gagaaaggcc ttataagtgt ggtgactgtg ggaaatcctt
361 tagtcaaagc tccatcctta ttcaacaccg gagaattcat actggagcaa ggccttatga
421 gtgtggccag tgtggaaagt cctttagcca aaagtctggt ctcattcaac accaagtggt
481 tcacactgga gaaaggcctt atgagtgcaa caaatgtggg aattccttta gccaatgctc
541 cagcctcata catcaccaaa aatgtcataa cacatagagg cctcatgaat gcagcaaatg
601 tggaagcgcc ttcaactcaa gatctatcat catttagctc ctgaaagtcc acacttaagt
661 agagccttag acctacaggg aaagtgctgt ctctgtagta ttgtagcagt agagagcctt
721 tgtgagggag ccatctgcct gaagttgaac ctcattcttc cttgtttctc tggtagaaac
781 catctaccct ctaccacctt gcacagtggg cactggtcac tcctatgtgc taagacaagg
841 cagacatctg tgtgttctct taagtctttg gaggaaatct tgagcagtct aagcctttag
901 agaaaattca ttcttttttc tgactgatca cagcatacgt gtgacccagt ttgggtcagg
961 agggcccagc cttggttctg ctggacactt atgtgcaagg attcccttca tgtaaattct
1021 tggtctcaca tgacacttgg tcattcttcc agcctccatg tcaccacgtg gtgaatggct
1081 gcctcacatt gctccagttt gtgcactaat aaaagcctta tatttgaatc tacctgtagt
1141 cttggggttc tgtttactgt gtggggtggc tgggagacag acttcaactc tatatgaagg
1201 aatggatggc ttttgtgggc ctctgcagga aagtaagatg acagagtaat tctaattctg
1261 gttttggtca tacttgcttt gctacctaaa atctcctagg aaaaaatgca aggttttggt
1321 tattctaatt tgtggcctgg atccctattc tttctgtgag actagaggtc atcctgagga
1381 gaggccagct gttatgacaa gcatgtgtgc ttcagggaat aggacaattt tattccattg
1441 tttccagagg atgtcatatg atgcccagtg ctgctgagaa gcttttcatg gggttctata
1501 aggaggcatg ccctgatatc aaacattcca taggccgatg tcacgcagaa gacaacgcga
1561 gtcacatgtg aactgtaatt ggtacagaaa tacctgggta tttctgtact gtgtgtactg
1621 tagcaaacta gttggaatgt gcctcttata aaagtacatt tacaaatctt cccgtgactg
1681 tggctttgag cagtcatagg acctagaaat ctgtgtatgt ccaatagctg aggttatttt
1741 cagcaaaaat aattaaaggg ttttattttt taattcttgt tggttttcta ggttgttcac
1801 ctcaagtgca ttgctgtaga ggcagaaaaa ggaggataaa gataacagaa gtcctatagg
1861 ccagggatgt attgatagct cttgtgattt ccaccagtgt tgctgttgtc tcaaattgcc
1921 acagccttca ttgcttgcca acatttcctg catggaggga ctcatggttg cccttcccca
1981 ggcctgaaga gagagtgcag tcaacatgag attgctaggc attctggttt ctgaaagttg
2041 ggtgatcaga tactttattg tgaaacatgt tttacaaact ttcttgatgt gtaagtgaca
2101 tgccatagtt tacatccatt tatggtgtat aatttgaaga gtttgtcata caagcctgtg
2161 aaaccataat catgatcatg aacatattca tgattcacct cttgctgttt tacaatctct
2221 gcgtgtactt tccaggcctt caggagtcct gtcatttact ttccctacag gagaatagtt
2281 tgtgttttct aggattttat gtgaattgaa acgtaaaata cttactccat ttttcctgat
2341 gatgcacaat tttttttttt ttttttgaga tggagtctca gtctgtcacc aggctggagt
2401 gcagtggcat gatcttggct cactccaacc tcctcctggg ttccagcgat tctcctgcct
2461 cagcctcctg agaagctagg actacaggca tgcactacca cgcccaacta atttttgtat
2521 ttttagtaga gatgtggttt taccatgttt gccaggatgg tcttgatctc ttgacctcgt
2581 gatccgcccg cctcagcctc ccgaagtgct gggattacag gcgtaagcca ccacaccagc
2641 tgatgcacaa ttacttttaa gatttatcaa tattgcttat gtgaatagtt catttgtatt
2701 gctgagaaat agtctgtgga tatgtcacaa tttggataaa cagttggatg ctttccagtt
2761 ttgggctgtt gcaaataatg ctactatgaa cataggcata taactcttaa tatgcagaaa
2821 tgctttattt ctcctgtgtc agtagtacag tgtacgtgaa tgcgtcactt ttaaagacaa
2881 ggccagacta taacctaact gtaccatttg cattctcatc aacagtatgt gaaccttctt
2941 atttctctac attcttgcca tacttggtat ggttagtctt tttaatttta gttgttttaa
3001 tagctgtata atagcatctg tctgtgattt tattgcattt ttctggtatt ttatggtatt
3061 gaacatttga acatcttgta tctagttgcc acctgtatat cctctttgga agaatgttta
3121 ttaatgtctt ttgcttattt ttaaatggat gttggtgata ctttttcatt aataaataga
3181 cgtataacaa aaaaaaaaaa aaa
//