LOCUS BC047296 2498 bp mRNA linear HTC 13-APR-2006
DEFINITION Homo sapiens F-box protein 42, mRNA (cDNA clone IMAGE:4428383),
with apparent retained intron.
ACCESSION BC047296
VERSION BC047296.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2498)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2498)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: c Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62955043
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2498
/db_xref="H-InvDB:HIT000098502"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4428383"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 626 a 663 c 627 g 582 t
ORIGIN
1 ctggctaatt tttgtatttt agtagagatg ggatttcgcc atgttgccca cgctggtctc
61 gaactcctga cctaaggtga tctgccggcc tcagaatccc aaagtgctgg gactacaggt
121 gtgagccact gcacccaacc aagaactact atattttctg ttgagtggaa tgtcatggcc
181 agctcctcgg acagtgaaga tgacagtttc atggctgtgg accaggaaga aactgtgctg
241 gaagggacaa tggatcaaga tgaggagccc cacccagtat tggaggctga ggagactaga
301 cataataggt ccatgtcgga gctgccagaa gaggttttgg agtatatcct gtcctttctc
361 tcaccgtatc aggaacacaa aactgcggcc cttgtctgca aacagtggta tcgacttatc
421 aaagatggaa cctcactcca tcacccaggc tggagttcag tggcgcagtc tcagctcatt
481 gcaacctcca cctcctgggt tcaaggaatt ctcctgcttc cacctcccaa gtagctggga
541 ttacaggtgt agcccatcag tgttatcatg gtttcatgaa ggctgtccag gaaggaaaca
601 ttcagtggga gagccgtacc tatccttatc ctggaacccc aatcactcag cgcttctcgc
661 acagtgcatg ctattatgat gctaatcagt ctatgtatgt gtttggaggc tgtacccaga
721 gcagctgcaa tgctgctttc aatgacctct ggagacttga cctaaacagc aaagagtgga
781 tccgaccttt ggcttcaggg tcctatcctt cccccaaagc tggagcaact ctggtcgtgt
841 acaaggactt gctagtgctg tttggtggct ggacgcggcc aagcccttat cccctacacc
901 agccagagag attctttgat gaaatacaca cttactcacc ctctaaaaat tggtggaact
961 gcattgtgac aacccatggg ccacctccca tggctggcca ctcctcctgt gtgatagatg
1021 ataaaatgat tgtctttggt ggctctttag gatcccggca aatgagcaat gatgtctggg
1081 tccttgacct tgagcagtgg gcgtggtcca agccgaacat ctctggcccc agtcctcatc
1141 ctcgaggtgg ccaatctcag attgtcatag atgatgcaac tatcttaatc ctcggagggt
1201 gtggcggtcc caatgctcta ttcaaggatg cttggttgtt gcacatgcat tctggtcctt
1261 gggcctggca gccactcaag gtagaaaatg aagagcatgg ggccccagaa ctgtggtgcc
1321 atccagcttg ccgggtggga cagtgtgtgg tggtcttcag ccaggctcct agtgggagag
1381 ccccactcag ccccagtttg aactctcgcc catcacctat cagtgccact cctccagctc
1441 tcgttcctga aacccgagag taccgctctc agtctccagt aagaagcatg gatgaagctc
1501 cttgtgttaa cggccgctgg ggaacactga gacccagggc tcaaaggcag actccttcag
1561 gttcccggga agggagcctt tccccagcca gaggagacgg ctctcctatc ctcaatggtg
1621 ggagtttgtc tccaggaacg gcagctgtgg gtggctcttc tttggacagt cctgtacagg
1681 ccatatctcc aagtactcca tctgctcctg aaggatacga cctgaaaata ggactttctt
1741 tggccccccg acgaggatca ctaccagatc agaaagatct gagattagga tccatagatc
1801 tgaattggga tctgaaaccc gcttccagta gtaatcccat ggatggcatg gacaatagga
1861 cagttggggg aagtatgaga caccctcctg aacagacaaa tggtgtgcat accccacctc
1921 acgtggccag tgcccttgca ggggccgtct ccccaggtgc cctgcgtcgg agtctggaag
1981 ccatcaaagc gatgtcctcc aaaggcccct cggcctctgc agcactaagt cctcctcttg
2041 ggtcttctcc aggctctcct gggagccaga gtttgagcag tggagaaaca gtgcccatcc
2101 ctcgcccagg gcctgcccaa ggagatggac attccttacc tcccattgct cgccgcctgg
2161 gccaccaccc tccacagtcc ctaaatgttg gcaaacccct ataccagagt atgaactgca
2221 agcccatgca gatgtacgtg ctggacatta aagacaccaa ggagaagggg cgggtcaaat
2281 ggaaagtatt taatagcagt tctgtggttg gacctcctga aaccagcctg cataccgtgg
2341 tacaaggcag gggtgaactc atcatatttg gaggactcat ggacaagaaa cagaatgtga
2401 agtactatcc aaaaacaaac gccttgtact ttgtacgagc aaagagataa tgtgttctaa
2461 accccaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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