LOCUS BC047243 5188 bp mRNA linear HUM 20-JUL-2007
DEFINITION Homo sapiens zinc finger protein 107, mRNA (cDNA clone MGC:47643
IMAGE:6066829), complete cds.
ACCESSION BC047243
VERSION BC047243.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5188)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5188)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: p Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62243639.
FEATURES Location/Qualifiers
source 1..5188
/db_xref="H-InvDB:HIT000053099"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47643 IMAGE:6066829"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..5188
/gene="ZNF107"
/gene_synonym="smap-7"
/gene_synonym="Y8"
/gene_synonym="ZFD25"
/db_xref="GeneID:51427"
/db_xref="HGNC:HGNC:12887"
/db_xref="MIM:603989"
CDS 454..2805
/gene="ZNF107"
/gene_synonym="smap-7"
/gene_synonym="Y8"
/gene_synonym="ZFD25"
/codon_start=1
/product="zinc finger protein 107"
/protein_id="AAH47243.1"
/db_xref="GeneID:51427"
/db_xref="HGNC:HGNC:12887"
/db_xref="MIM:603989"
/translation="MVAKPPVMSFHFAQDLWPEQNIKDSFQKVTLRRYGKCEYENLQL
RKGCKHVDECTGHKGGHNTVNQCLTATPSKIFQCNKYVKVFDKFSNSNRYKRRHTGNK
HFKCKECSKSFCVLSQLTQHRRIHTRVNSYKCEECGKAFNWFSTLTKHKRIHTGEKPY
KCEECGKAFNQSSQLTRHKIIHTEEKPNKCEECGKAFKQASHLTIHKIIHTGEKPYKY
EECGKVFSQSSHLTTQKILHTGENLYKCKECGKAFNLFSNLTNHKRIHAGEKPYKCKE
CGRAFNISSNLNKQEKIHTGGKLNKCEECDKAFNRSLKLTAHKKILMEEKPYKCEECG
KVFNQFSTLTRHKIIHTGEKPYKCKECGKAFNQSSNLTEHKKIHTAEKSYKCEECGKA
FNQHSNLINHRKIYSGEKPYKCEECGKAFNRSSTLTRHKKIHTGEKPYKCEECDRAFS
QSSNLTEHKKIHTGEKPYKCEECGKAFNRFSTLTKHKRIHTGEKPYKCEECGKAFNQS
YQLTRHKIVHTKEKLNKCEEFGKAFKQSSHRTIHKIIHTGEKPYKCEEHGKVFNQSSN
LTTQKIIHTGENLYKFEEHGKAFNLFSNITNHKIIYTGEKPHKCEECGKAYNRFSNLT
IHKRIHTGEKPYQCAECGKAFNCSSTLNRHKIIHTGEKPYKCKECGKAFNLSSTLTAH
KKIHTGEKPYKCEECGKAFNQSSNLTTHKKIHTSEKPYKCEECGKSFNQFSSLNIHKI
IHTGEKPYKCGDYGRAFNLSSNLTTHKKIHTGEKPYKCEYGKT"
BASE COUNT 1964 a 951 c 893 g 1380 t
ORIGIN
1 ctagaggccc agcctctgtg tccctgtgac ctgcagatat tgggagatcc acagctaaga
61 cgccgggact ccctggaaac ctagaaatga ctgtgccata acacacattt gatgctgaaa
121 tccgggatag gggaactcct ttgggagtcg tgtcccttaa ccccttcccc cgacttcttg
181 aagagaccca cccgcgacct cggtacctcg gaccagctct gtaaaagccc cgcctctgcc
241 ttcggatagg aaccactgac atttaaagat gtcgccatag aattctctct ggaggagtgg
301 caatgcctgg atactgcaca gcgggattta tataggaatg tgttgttaga gaactacaga
361 aacctggtct ttttgggtat tgctgtctct aagccatatc tgatcacctg tctggagcaa
421 aaaaaagagc cctggaatat aaaaagacat gagatggtag ccaaaccccc agtaatgtct
481 tttcattttg cccaagacct ttggccagag cagaacataa aagattcttt ccagaaagtg
541 acactgagaa gatacggaaa atgtgaatat gagaatttac agttaagaaa aggctgtaaa
601 catgtggatg agtgtacggg gcacaaagga ggtcataata cagttaacca atgtttgaca
661 gctaccccaa gcaaaatatt ccagtgtaat aaatatgtga aagtctttga taaattttca
721 aattcaaata gatataagag aagacataca ggaaacaaac acttcaaatg taaagaatgt
781 agcaaatcat tttgcgtgct ttcacaacta actcagcata gaagaattca tactagagtg
841 aattcctaca aatgtgaaga atgtggaaaa gcctttaact ggttctcaac tcttactaaa
901 cataagagaa ttcatactgg agaaaagccc tacaaatgtg aagaatgtgg caaagccttt
961 aaccagtcct cacaacttac taggcataag ataattcata ctgaagagaa acccaacaaa
1021 tgtgaagaat gtggcaaggc ctttaaacag gcctcacacc ttactataca taaaataatt
1081 catactggag aaaaacctta caaatatgaa gaatgtggca aagtctttag ccagtcctca
1141 caccttacta cacaaaagat acttcacact ggagagaacc tctacaagtg taaagaatgt
1201 ggaaaagctt ttaacctatt ctcaaatctt actaaccata agagaattca tgctggggag
1261 aaaccctaca aatgtaaaga atgtggcaga gcttttaaca tatcctcaaa ccttaataaa
1321 caggagaaaa ttcatactgg agggaaactc aacaaatgtg aagaatgtga caaagctttt
1381 aaccgatcct taaaacttac tgcacataag aaaattctaa tggaagagaa accctacaaa
1441 tgtgaagaat gtggcaaagt ctttaaccag ttctcaactc ttactagaca taagataatt
1501 catactggag agaaacccta caaatgtaaa gaatgtggca aagcttttaa ccaatcttca
1561 aaccttactg aacataagaa aattcatact gcagagaaat cctataaatg tgaagaatgt
1621 ggcaaagctt ttaaccaaca ctcaaaccta attaaccata ggaaaattta ttctggagag
1681 aaaccataca aatgtgaaga atgtggaaaa gcttttaatc gatcctcaac ccttactaga
1741 cataagaaaa ttcatactgg agagaaaccc tacaaatgtg aagaatgtga cagagctttt
1801 agccagtctt caaaccttac tgaacataag aaaattcata ctggagagaa accctataaa
1861 tgtgaggaat gtggcaaagc ttttaaccga ttctcaaccc ttactaaaca taagagaatt
1921 catactggag aaaaacccta taaatgtgaa gaatgtggaa aagcctttaa tcaatcctat
1981 caacttacta gacataagat agttcatact aaagagaaac tcaacaaatg tgaagaattt
2041 ggcaaggcct ttaaacagtc ctcacaccgt actatacata aaattattca tactggagag
2101 aaaccctaca aatgtgaaga acatggcaaa gtttttaacc agtcctcaaa ccttactaca
2161 caaaagataa ttcatactgg agagaacctc tacaaatttg aagaacatgg aaaagctttt
2221 aacctattct caaacattac taaccataag ataatttata ctggagagaa accccacaaa
2281 tgtgaagaat gtggaaaagc ttataaccga ttctcaaacc taactataca taagagaatt
2341 catacgggag agaaacctta ccaatgtgca gaatgtggca aagcctttaa ctgctcctca
2401 acccttaata gacataagat aattcatact ggagagaaac cttacaaatg taaagaatgt
2461 ggcaaagctt ttaacctatc ctcaaccctt actgcacata agaaaattca tactggagag
2521 aaaccctata aatgtgaaga atgtggcaaa gcttttaacc aatcctcaaa ccttactaca
2581 cataagaaaa ttcatacttc agagaaaccc tacaaatgtg aagaatgtgg caaatccttt
2641 aaccagttct catctcttaa tatacataag ataattcata ctggagagaa accctacaaa
2701 tgtggagatt atggcagagc tttcaaccta tcctcaaatc ttactacaca taagaaaatt
2761 catactggag agaaacccta caaatgtgaa tatggcaaaa cttaattgat cctacaagct
2821 tactacacat aagaaaattc atactggaga gaaactacaa atgtgaagaa tgtgttaaag
2881 cctttaacaa gtcttcaact ttttctgcac acacgaggta ttttatactg gtgagaaacc
2941 ttacaatgta aagaatgtgg cacagctttt aactaatctt caaaccttac tgaaagttga
3001 gaaaattcgt actggagaga atcctacaaa tgtgaaaaat gtggcaaatc ctttaactga
3061 tcctcaactt ttactaaaca taaggtaatt catactggag aaaagccata caaatgagaa
3121 gaatgtggca atgcctttaa tcagtcctca cacctttcta cacataagat aatttatact
3181 ggagaggaac tctatagttg tgaagaatgt ggcaaagctt ttaaccaatc ctcatacctt
3241 actatacaga aattcatact ggagagaaag cctacaattg tgaagaatgt ggcaaagctt
3301 ttaaccttcc ttaaccctta actgtagata agaaaattca tactggaaag aaaccctaca
3361 aatgtgaagt ctgtggcaaa gcttttaact gattctcaac tcttactaca tgtaagagta
3421 tttatactgg aaagaaaccc tacaaatgta aaaaacgtgg caatgccttt aactggtcct
3481 cacaccttgc tacatataag acagtttata ctttgagaga aaccctgcaa atgtgaataa
3541 tgtggcaata ctttaaacca atcctcaaac ctcactaaac ataagataat actgaaaact
3601 ttacaaacct gaatgatgtg acaataattt tgacaacacc tcgaactttc taacataaat
3661 catactggtg aaaaatccta gaaatgtgaa aaatatcaca aagcctttaa atggttgtca
3721 cacttgattg taggtaagaa tccatactga agaaaactcc tggaagtgta aaaaatgtgg
3781 caacactttt aataaatgct caccccttat tgcacaggaa agcatttata cttcagaaag
3841 attgtacaaa tacagggaat gtggaaaagc cattattatc tgctcagatt ttactcaaca
3901 ttagagagtt agtacgtaat aaaagcatta taaatgcaat ttttgtcaag agatctttca
3961 gaaaatataa gcctttaaag tgaagaagag gagccagttg tgctggctca catctgtaat
4021 gccagcactt tgggaggcca aggtgggtgg atcacctgag ggcaggagtc tgagaccagc
4081 ctggccaaca tagcaaaacc ccatctctat taaaaatttt acaaaaatta gctgcgtgtg
4141 gtggcaggcc cctgtaatcc cagctaattg ggaggctgaa gcaggagaat tgctcaaacc
4201 tgggaggcga agattgcagt gagctgaaat cacaccacta cactccagcc aaagcaacaa
4261 gagcaaaaac ttcgtctcaa aaacaaaaca aaaaaagagt attcattgtg aggacaaaca
4321 atacaaatac gaagagggtt gtagtacctt tacttgtatc acagatactt ttgtacccat
4381 tttgcactag aggaaaacca tgaagcagtt gctcaaatgt tgttcaacac cagaaaattt
4441 atattggaga aaagcactgt aaatgtaatg catttgtgaa aacatttttt aaaaaactac
4501 agcttagaaa ataccagagg cctcatacta aaatatattt ttgcaagtga agtaaatata
4561 aaaataattt aatccaaaat taagtctata taaatatcag agaattcaca gtagaaatat
4621 ctaaggtact gacacttcag acattgctga gtatagaatc agaatgctga gtatagaaaa
4681 taatttaaaa ctaaagttgg taggtaaata atgtgtatat aactttaaaa gaagtagaat
4741 ttttttgtag atgtataatt acattcaaat tatatttttt cttgaaaaat tagtttctga
4801 aaagcaaata atgatgtaat tcaactcaaa ttcatgctct tcattcctat tgtattcaca
4861 tgtgaaagca tgtgattaat ttttcatgca tcaaagatat gagaaatcat ttctgttagg
4921 tcggtattat ttatgacact ttctatgaaa gaataaggac attaaaatgt aagatgcatg
4981 atgaaaacct gagtgaagag gctgtttgtg tttaacttat aatattgagt gatccatgaa
5041 gtaggttttc agagcaatat tcttctgcat tatagtaaga gaaaaccatt tttaatctta
5101 gttaaaatta aagtgaatta gtagtatatc attttactat ttgtactttt atgtaataaa
5161 atgcaatgtg tttaaaaaaa aaaaaaaa
//