LOCUS BC047073 2076 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens LMBR1 domain containing 1, mRNA (cDNA clone MGC:48309
IMAGE:5274221), complete cds.
ACCESSION BC047073
VERSION BC047073.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2076)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2076)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: e Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542670.
FEATURES Location/Qualifiers
source 1..2076
/db_xref="H-InvDB:HIT000053081"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48309 IMAGE:5274221"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2076
/gene="LMBRD1"
/gene_synonym="bA810I22.1"
/gene_synonym="FLJ11240"
/gene_synonym="RP11-810I22.1"
/db_xref="GeneID:55788"
/db_xref="HGNC:HGNC:23038"
CDS 116..1738
/gene="LMBRD1"
/gene_synonym="bA810I22.1"
/gene_synonym="FLJ11240"
/gene_synonym="RP11-810I22.1"
/codon_start=1
/product="LMBR1 domain containing 1"
/protein_id="AAH47073.1"
/db_xref="GeneID:55788"
/db_xref="HGNC:HGNC:23038"
/translation="MATSGAASAELVIGWCIFGLLLLAILAFCWIYVRKYQSRRESEV
VSTITAIFSLAIALITSALLPVDIFLVSYMKNQNGTFKDWANANVSRQIEDTVLYGYY
TLYSVILFCVFFWIPFVYFYYEEKDDDDTSKCTQIKTALKYTLGFVVICALLLLVGAF
VPLNVPNNKNSTEWEKVKSLFEELGSSHGLAALSFSISSLTLIGMLAAITYTAYGMSA
LPLNLIKGTRSAAYERLENTEDIEEVEQHIQTIKSKSKDGRPLPARDKRALKQFEERL
RTLKKRERHLEFIENSWWTKFCGALRPLKIVWGIFFILVALLFVISLFLSNLDKALHS
AGIDSGFIIFGANLSNPLNMLLPLLQTVFPLDYILITIIIMYFIFTSMAGIRNIGIWF
FWVRLYKIRRGRTRPQALLFLCMILLLIVLHTSYMIYSLAPQYVMYGSQNYLIETNIT
SDNHKGNSTLSVPKRCDADAPEDQCTVTRTYLFLHKFWFFSAAYYFGNWAFLGVFLIG
LIVSCCKGKKSVIEGVDEDSDISDDEPSVYSA"
BASE COUNT 611 a 375 c 397 g 693 t
ORIGIN
1 ctccgcccct ttaaccttta gggtgcgcgg gtgcagtata tctcgcgctc tctccccttt
61 ccccctcccc tttccccacc ccgggcgctc aggttggtct ggaccggaag cgaagatggc
121 gacttctggc gcggcctcgg cggagctggt gatcggctgg tgcatattcg gcctcttact
181 actggctatt ttggcattct gctggatata tgttcgtaaa taccaaagtc ggcgggaaag
241 tgaagttgtc tccaccataa cagcaatttt ttctctagca attgcactta tcacatcagc
301 acttctacca gtggatatat ttttggtttc ttacatgaaa aatcaaaatg gtacatttaa
361 ggactgggct aatgctaatg tcagcagaca gattgaggac actgtattat acggttacta
421 tactttatat tctgttatat tgttctgtgt gttcttctgg atcccttttg tctacttcta
481 ttatgaagaa aaggatgatg atgatactag taaatgtact caaattaaaa cggcactcaa
541 gtatactttg ggatttgttg tgatttgtgc actgcttctt ttagttggtg cctttgttcc
601 attgaatgtt cccaataaca aaaattctac agagtgggaa aaagtgaagt ccctatttga
661 agaacttgga agtagtcatg gtttagctgc attgtcattt tctatcagtt ctctgacctt
721 gattggaatg ttggcagcta taacttacac agcctatggc atgtctgcgt tacctttaaa
781 tctgataaaa ggcactagaa gcgctgctta tgaacgtttg gaaaacactg aagacattga
841 agaagtagaa caacacattc aaacgattaa atcaaaaagc aaagatggtc gacctttgcc
901 agcaagggat aaacgcgcct taaaacaatt tgaagaaagg ttacgaacac ttaagaagag
961 agagaggcat ttagaattca ttgaaaacag ctggtggaca aaattttgtg gcgctctgcg
1021 tcccctgaag atcgtctggg gaatattttt catcttagtt gcattgctgt ttgtaatttc
1081 tctcttcttg tcaaatttag ataaagctct tcattcagct ggaatagatt ctggtttcat
1141 aatttttgga gctaacctga gtaatccact gaatatgctt ttgcctttac tacaaacagt
1201 tttccctctt gattatattc ttataacaat tattattatg tactttattt ttacttcaat
1261 ggcaggaatt cgaaatattg gcatatggtt cttttgggtt agattatata aaatcagaag
1321 aggtagaacc aggccccaag cactcctttt tctctgcatg atacttctgc ttattgtcct
1381 tcacactagc tacatgattt atagtcttgc tccccaatat gttatgtatg gaagccaaaa
1441 ttacttaata gagactaata taacttctga taatcataaa ggcaattcaa ccctttctgt
1501 gccaaagaga tgtgatgcag atgctcctga agatcagtgt actgttaccc ggacatacct
1561 attccttcac aagttctggt tcttcagtgc tgcttactat tttggtaact gggcctttct
1621 tggggtattt ttgattggat taattgtatc ctgttgtaaa gggaagaaat cggttattga
1681 aggagtagat gaagattcag acataagtga tgatgagccc tctgtctatt ctgcttgaca
1741 gccttctgtc ttaaaggttt tataatgctg actgaatatc tgttatgcat ttttaaagta
1801 ttaaactaac attaggattt gctaactagc tttcatcaaa aatgggagca tggctataag
1861 acaactatat tttattatat gttttctgaa gtaacattgt atcatagatt aacattttaa
1921 attaccataa tcatgctatg taaatataag actactggct ttgtgaggga atgtttgtgc
1981 aaaatttttt cctctaatgt ataatagtgt taaattgatt aaaaatcttc cagaattaaa
2041 aaaaaaaaaa aaaaaaaaat aaaaaaaaaa aaaaaa
//