LOCUS BC047057 1161 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens phosphodiesterase 1A, calmodulin-dependent, mRNA (cDNA clone IMAGE:5275668), with apparent retained intron. ACCESSION BC047057 VERSION BC047057.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1161) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1161) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-FEB-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 91 Row: f Column: 20 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1161 /db_xref="H-InvDB:HIT000098436" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5275668" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" BASE COUNT 359 a 185 c 172 g 445 t ORIGIN 1 ttagccatat tctatatgca tatttattat gcatcattgt aatttaagat atatttggat 61 gtaggctgta taaatgcttt taattgttct gtgaatagat ccttagcttt agtttcacct 121 gaatcttgtg caaaacacag ctaaataatt gaattgtatt atagacatta tgaggtaatt 181 gatcttttaa atgtaaggag taagattgat ctataataat gtgctgggga aaacatttat 241 agatatgtac atcatggtta ctttttgtcc tttcaaatgg actttttatt tctatttatg 301 gagagactgt aactactgct tttaatgtct ttttaaagca gctatttacc agcttgaaaa 361 tatcatgcat ttaaaataga aactatctgg ggagtctaat tactattgtt cctatttgag 421 ccagttgtct ttcagtaaag ctatagaatc tctcaaagaa gtaaatagaa atactacttc 481 ttaaatgtca taggaagcat atccactttg tttctattag tactttaaga tctataagac 541 cttattacta aaaagtagag gaatataaag aattcatcaa tttctgtata tgggctttaa 601 cctaattttc caggttatgc gacttataaa gcactgtgac caaacttcca gagacagtaa 661 aaaaaaaaaa aagaaaaaaa agttttactc cttcagaagt attgtcatgc tactgctgta 721 cttattttcc taatctctct ctttctatct gctatactcc ctccttttct ttctttttct 781 tttaagcttt tatatttatt ccttcctttg ttttcctctc tgtaagacag ctactactga 841 gcactaatta gtagaaagtc agagtggagg ttatctgtgc atgtctttct gcaaacatta 901 ctgttgaggc catctgaaga gagggattga taggttaggc tgttgcaccg tgaatgtcct 961 gctttgcatt tttaacctca gctccccaac atatatatct tgcagtttat atgccttttc 1021 atttaaccga aacctctttt atttaatttt taacataaca acctacaatt cttgtgtttt 1081 tattatgctg tatttttctg tgtttcttat tacatgtgat tgctaaataa atcatatttg 1141 agcgaaaaaa aaaaaaaaaa c //