LOCUS BC046958 2611 bp mRNA linear ROD 11-AUG-2006
DEFINITION Mus musculus forkhead box G1, mRNA (cDNA clone MGC:54714
IMAGE:6314329), complete cds.
ACCESSION BC046958
VERSION BC046958.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 2611)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2611)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Susan L. Sullivan, PhD.
cDNA Library Preparation: ResGen, Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 100 Row: e Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6679842.
FEATURES Location/Qualifiers
source 1..2611
/organism="Mus musculus"
/mol_type="mRNA"
/db_xref="taxon:10090"
/clone="MGC:54714 IMAGE:6314329"
/tissue_type="Olfactory epithelium, neonatal mouse,
C57Bl/6"
/clone_lib="NIH_MGC_129"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2611
/gene="Foxg1"
/gene_synonym="BF-1"
/gene_synonym="Bf1"
/gene_synonym="Hfh9"
/db_xref="GeneID:15228"
/db_xref="MGI:MGI:1347464"
CDS 204..1649
/gene="Foxg1"
/gene_synonym="BF-1"
/gene_synonym="Bf1"
/gene_synonym="Hfh9"
/codon_start=1
/product="forkhead box G1"
/protein_id="AAH46958.2"
/db_xref="GeneID:15228"
/db_xref="MGI:MGI:1347464"
/translation="MLDMGDRKEVKMIPKSSFSINSLVPEAVQNDNHHASHGHHNSHH
PQHHHHHHHHHHPPPPAPQPPPPPPQQQQQQPPPAPQPPQARGAPAADDDKGPQPLLL
PPSTALDGAKADALGAKGEPGGGPAELAPVGPDEKEKGAGAGGEEKKGAGEGGKDGEG
GKEGDKKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ
NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTTSRAKL
AFKRGARLTSTGLTFMDRAGSLYWPMSPFLSLHHPRASSTLSYNGTTSAYPSHPMPYS
SVLTQNSLGNNHSFSTANGLSVDRLVNGEIPYATHHLTAAALAASVPCGLSVPCSGTY
SLNPCSVNLLAGQTSYFFPHVPHPSMTSQTSTSMSARAASSSTSPQAPSTLPCESLRP
SLPSFTTGLSGGLSDYFTHQNQGSSSNPLIH"
BASE COUNT 626 a 788 c 639 g 558 t
ORIGIN
1 cttgaggggt ggttgcagct tttgctacat gccttgccag cgccggagcc tgcggtccaa
61 ctgcgctgct gccggagcgc tcagtgccgc ctccgctgcc cgctcccccc gcgccccact
121 ccgaacccgc tggtcgcccg ccgcgctgct gcccggctcc cgtgccgccg ccgccgccgc
181 cgccgccccc cgacgcctgg gtgatgctgg acatgggaga taggaaagag gtgaaaatga
241 ttcccaagtc ctcgttcagc atcaacagcc tggtccccga ggccgtccag aacgacaacc
301 accacgcgag ccacggccac cacaacagcc accaccccca gcatcaccat catcatcacc
361 accaccacca cccgccgccg cccgcgcccc agccgcctcc accgccgccc cagcagcagc
421 agcagcagcc gcccccggcc ccgcagcccc cgcaggcgcg cggcgcccca gcagccgacg
481 acgacaaggg tccccagccg ctcctgctcc cgccctccac cgccctggac ggggccaagg
541 ctgacgcact tggagccaaa ggcgagccgg gcggcgggcc ggcggagctg gcgcccgtcg
601 ggccggacga gaaggagaag ggcgcgggcg ccggggggga ggagaagaaa ggggcgggcg
661 agggcggcaa ggacggggag gggggcaagg agggcgacaa gaagaacggc aagtacgaga
721 agccgccgtt cagctacaac gcgctcatca tgatggccat caggcagagt cccgagaagc
781 gcctgacgct caatggcatc tatgagttca tcatgaagaa cttcccctac taccgcgaga
841 acaagcaggg ctggcagaac tccatccgcc acaacctgtc cctcaacaag tgcttcgtga
901 aggtaccgcg ccactacgac gacccgggca agggcaacta ctggatgctc gacccgtcga
961 gcgacgacgt gttcatcggc ggcacgaccg gcaagctgcg gcgccgctcc accacgtctc
1021 gggccaagct ggcctttaag cgcggggcgc gcctcacctc caccggcctc accttcatgg
1081 accgcgccgg ctccctctac tggcccatgt cgcccttcct gtccctgcac cacccccgcg
1141 ccagcagcac tttgagttac aacgggacca cgtcggccta ccccagccac cccatgccct
1201 acagctccgt gttgactcaa aactcgctgg gcaacaacca ctccttctcc accgccaacg
1261 ggctgagtgt ggaccggctg gtcaacgggg agatcccgta cgccacgcac cacctcacgg
1321 ccgctgcgct cgccgcctcg gtgccctgcg gcctgtcggt gccctgctcc gggacctact
1381 ccctcaaccc ctgctccgtc aacctgctcg cgggccagac cagttacttt ttcccccacg
1441 tcccgcaccc gtcaatgact tcgcagacca gcacgtccat gagcgcccgg gccgcgtcct
1501 cctctacgtc gccgcaggcc ccctcgaccc tgccctgtga gtctttaaga ccctctttgc
1561 caagttttac gacaggactg tccgggggac tgtctgatta tttcacacat caaaatcagg
1621 ggtcttcttc caacccttta atacattaac atccggggga ccagactgta agtgaacgtt
1681 ttacacacat ttgcattgta aatgataatt aaaaaaataa gtccaggtat tttttattaa
1741 gccccccctc cccatttctg tacgtttgtt cagtctttag ggttgtttac tattctaaca
1801 cggtgtggag tgtcagcgag gtgcaatgtg ggagaataca ttgtagaata taaggtttgg
1861 acgtcaaatt atagtagaat gtgtatctaa atagtgactg ctttgccatt tcattcaaac
1921 ctgacaagtc tatctcaaca ggctgccaga tttccatgtg tgcagtatta taagttatca
1981 tggagctatc tggtggacgc aggccttgag aacaacctaa attatgaaga gagttttaaa
2041 atgttaaatt gtaatttgta tttaagaatt tgtagtaaag gtgcccaagg aattatattg
2101 gccatttatt gttttgtcct ttttctttaa agaactgttt ctttcctttt gtttactttt
2161 agaccaaaga ttggattcta gcaaatgcac ttggtatact aagtattaaa acaagtaaac
2221 aaacaaacga aaaaggaagg ttgtttagtt ggcaacactg cccattcaat tgaatccgaa
2281 ggagacaaaa ttaaggattg ccttcagttt gtgttgtgta tatttcgatg tatgtggtca
2341 ctaacaggtc acttttattt tttctaaatg tagtgaaatg ttaataccta ttgtacttat
2401 aggtaaacct tgcaaatatg taacctgtgt tgcgcaaatg ccgcatcaat ttgagtgatt
2461 gttaatgttg tcttaaaatt tcttgattgt gatactgtgg tcatatgccc gtgtttgtca
2521 cttacaaaaa tgtttactat gaacacacag aaataaaaaa taggctaaat tcaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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