LOCUS BC046645 1787 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens collagen and calcium binding EGF domains 1, mRNA (cDNA
clone MGC:50861 IMAGE:5766933), complete cds.
ACCESSION BC046645
VERSION BC046645.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1787)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1787)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (10-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: j Column: 24.
FEATURES Location/Qualifiers
source 1..1787
/db_xref="H-InvDB:HIT000053051"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50861 IMAGE:5766933"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1787
/gene="CCBE1"
/gene_synonym="FLJ30681"
/gene_synonym="KIAA1983"
/db_xref="GeneID:147372"
CDS 279..926
/gene="CCBE1"
/gene_synonym="FLJ30681"
/gene_synonym="KIAA1983"
/codon_start=1
/product="CCBE1 protein"
/protein_id="AAH46645.1"
/db_xref="GeneID:147372"
/translation="MVKAGTCCATCKEFYQMKQTVLQLKQKIALLPNNAADLGKYITG
DKVLASNTYLPGPPGLPGGQGPPGSPGPKGSPGFPGMPGPPGQPGPRGSMGPMGPSPD
LSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPGPPGSFDFLLLMLADIRNDITE
LQEKVFGHRTHSSAEEFPLPQEFPSYPEAMDLGSGDDHPRRTETRDLRAPRDFYP"
BASE COUNT 535 a 441 c 394 g 417 t
ORIGIN
1 cagggtcttc ctggcatgtc taaataggaa cagctgagcc cagcttctag cagggcccct
61 ctccctctgt cctcccctct tccctgaccc tggggcatgc tggcaggacc tgagagctgt
121 aaaatcaccc acagttgagc cctcgcatgt cccgctgtca gctactctgt ccctgggacc
181 gcccttcccg atgctgtctc tctgggtctg gcttgcatcc agcctcccag acaggactga
241 gcctatctcc tttctcaggc catgagaagt ctgagaacat ggtgaaagcc ggaacttgct
301 gtgccacatg caaggagttc taccagatga agcagaccgt gctgcagctg aagcaaaaga
361 ttgctctgct ccccaacaat gcagctgacc tgggcaagta tatcactggt gacaaggtgc
421 tggcctcaaa cacctacctt ccaggacctc ctggcctgcc tgggggccag ggccctcccg
481 gctcaccagg accaaaggga agcccaggct tccccggtat gccaggccct cctgggcagc
541 ccggcccacg gggctcaatg ggacccatgg gaccatctcc tgatctgtcc cacattaagc
601 aaggccggag gggccctgtg ggtccaccag gggcaccagg aagagatggt tctaaggggg
661 agagaggagc gcctgggccc agagggtctc caggaccccc tggttctttc gacttcctgc
721 tacttatgct ggctgacatc cgcaatgaca tcactgagct gcaggaaaag gtgttcgggc
781 accggactca ctcttcagca gaggagttcc ctttacctca ggaatttccc agctacccag
841 aagccatgga cctgggctct ggagatgacc atccaagaag aactgagaca agagacttga
901 gagcccccag agacttctac ccatagcaca tcccaacacc gtcacgccaa aggaagagaa
961 agatcaactc acctgcagtt aaaccatcta aagagaagaa agaccactgg agacctagaa
1021 aacatacatt tttctcttct cttctcctga cgtctctcca ctcctcttct tccaaatacg
1081 atgctatttt cagagtcccc tcctaggcct gcagacatga gggagtgaat gattgattta
1141 cctgcttctc actaagagtc cattggggtg gtttgcattg taacttttct tttacatcct
1201 atttttccag gaactttgga tttaagtact ctcacagtgt cttaaatcat aaattcttga
1261 agttaaattt ggcagagtat caaaaggggg aaaatgacaa agtgagctct aagaaaatgt
1321 gaggctactt ctaagatgtg tgttcacaat agaccataac tcctctagta tcaaaattgg
1381 ggctcttcag ttaaaaaggg gtggggagga caaacgtgtc gatgtgcttt ggtggagaat
1441 tttttccttg tgcttctagt agactttaaa tattgtatcc ctttgtcaaa ccttgtttcc
1501 caaattcaat taaagagagg agagaattga atggcgttta gagaagatag aaaagaatca
1561 cagtcatata tttactgtta tatagattgc cacattctaa aattcaaata cggtgcttaa
1621 ggtttcatgc catgcttatc tgtaagtatc ctatttaggg aagaagatta aactctcttt
1681 tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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