LOCUS BC046441 1919 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 20, member B, mRNA
(cDNA clone MGC:34351 IMAGE:5197154), complete cds.
ACCESSION BC046441
VERSION BC046441.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1919)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1919)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: o Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281529.
FEATURES Location/Qualifiers
source 1..1919
/db_xref="H-InvDB:HIT000053040"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34351 IMAGE:5197154"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1919
/gene="FAM20B"
/db_xref="GeneID:9917"
/db_xref="HGNC:HGNC:23017"
CDS 162..1391
/gene="FAM20B"
/codon_start=1
/product="family with sequence similarity 20, member B"
/protein_id="AAH46441.1"
/db_xref="GeneID:9917"
/db_xref="HGNC:HGNC:23017"
/translation="MKLKQRVVLLAILLVIFIFTKVFLIDNLDTSAANREDQRAFHRM
MTGLRVELAPKLDHTLQSPWEIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVG
YKGTQLKALLILEGGQKVVFKPKRYSRDHVVEGEPYAGYDRHNAEVAAFHLDRILGFH
RAPLVVGRFVNLRTEIKPVATEQLLSTFLTVGNNTCFYGKCYYCRETEPACADGDIME
GSVTLWLPDVWPLQKHRHPWGRTYREGKLARWEYDESYCDAVKKTSPYDSGPRLLDII
DTAVFDYLIGNADRHHYESFQDDEGASMLILLDNAKSFGNPSLDERSILAPLYQCCII
RVSTWNRLNYLKNGVLKSALKSAMAHDPISPVLSDPHLDAVDQRLLSVLATVKQCTDQ
FGMDTVLVEDRMPLSHL"
BASE COUNT 527 a 435 c 478 g 479 t
ORIGIN
1 gccatggagc gagcctaggg cccgacagga actgtggaag gtgcatcagt gaagaaatgg
61 accaatgtgt ataatcatgg aatctccttg ctaaccatca ccaccagctc tccttaatac
121 atgagcaaga gtgggtcagg ggagaaggaa aagaggtcaa catgaagcta aagcagcgag
181 tcgtgctgtt agcaattctc cttgtcattt ttatcttcac caaagttttc ctgattgaca
241 acttagatac atcagctgcc aaccgggagg accagagggc ctttcaccga atgatgactg
301 gcttgcgggt ggagctggca cccaagctgg accatacctt gcagtctccc tgggagattg
361 cagcccagtg ggtggttccc cgggaagtgt accctgaaga gacaccagag ctgggggcag
421 tcatgcatgc catggccacc aagaaaatca ttaaagctga tgtgggttat aaagggacac
481 agctgaaagc cttactgata cttgaaggag gccagaaagt tgttttcaaa cctaagcggt
541 atagccgaga ccatgtggtg gaaggggaac cgtatgctgg ttatgataga cacaatgcag
601 aggtagcagc ctttcacttg gacaggattc tgggtttcca ccgagccccc ttggtagttg
661 gcagatttgt taatcttcgg acagagatca aacctgtcgc cacagagcag ctgttgagca
721 ccttcctaac tgtaggaaac aatacttgtt tttatgggaa gtgctattac tgccgagaaa
781 cagaaccagc ttgtgctgat ggagacataa tggagggatc tgtcacactt tggcttccag
841 atgtgtggcc tctgcagaag caccgtcacc catggggcag gacttaccga gaaggcaaat
901 tggccaggtg ggagtatgat gagagctact gtgatgctgt gaagaaaacg tccccttatg
961 actctggccc gcgcctcttg gacatcattg acacagctgt ctttgattac ctgattggca
1021 atgctgaccg ccatcactat gagagctttc aagatgatga aggcgctagt atgctcatcc
1081 ttcttgataa tgccaaaagc tttgggaacc cctcgctgga tgaaagaagc attcttgccc
1141 ctctctatca gtgttgcatc attcgggtgt ccacctggaa cagactgaac tacctaaaga
1201 atggtgtgct aaagtctgcc ttaaaatctg ccatggccca tgaccccatc tccccagtgc
1261 tctctgatcc tcatctggac gccgtggacc agcggctcct gagtgtcctg gccaccgtga
1321 agcagtgcac cgaccagttt gggatggaca cagtactggt ggaagacagg atgcctctct
1381 cacacttgta attctcgaca caaaataagt gaaacttctt tttacaaaga tagagaaaca
1441 gcacaatcaa ttccaaatgg tatgagatgg attggaagtg gccagcagca agttctggtg
1501 acgggacaga gtggccttgg atgtctttgg tattttctgt agtagaaact aaagcaaaga
1561 ccacaagttt cagagcatgg agacattcct gctgaatcgc cttctcacct cctcggcaat
1621 tgctcattct agggttgggc atcatagttg gtcagtctta attcccatgc caaaggacaa
1681 acaggtgtga catttggata gatgaatact gggattggct ctggagcatg tgttttgagt
1741 tgaaccttgc agtcctttct ctacgcccgt ggattttgtg gaaacacttt gcaatctctt
1801 tgtctttttt ttttttacca gaactagtta cattggaatg cttactgtcc tacagagtgg
1861 cagcaaataa aaccttgcat tccatcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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