LOCUS BC046359 2572 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Fanconi anemia, complementation group E, mRNA (cDNA
clone MGC:50663 IMAGE:6154799), complete cds.
ACCESSION BC046359
VERSION BC046359.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2572)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2572)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: p Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66879667.
FEATURES Location/Qualifiers
source 1..2572
/db_xref="H-InvDB:HIT000053034"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50663 IMAGE:6154799"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2572
/gene="FANCE"
/gene_synonym="FAE"
/db_xref="GeneID:2178"
/db_xref="HGNC:HGNC:3586"
/db_xref="MIM:600901"
CDS 192..1802
/gene="FANCE"
/gene_synonym="FAE"
/codon_start=1
/product="Fanconi anemia, complementation group E"
/protein_id="AAH46359.1"
/db_xref="GeneID:2178"
/db_xref="HGNC:HGNC:3586"
/db_xref="MIM:600901"
/translation="MATPDAGLPGAEGVEPAPWAQLEAPARLLLQALQAGPEGARRGL
GVLRALGSRGWEPFDWGRLLEALCREEPVVQGPDGRLELKPLLLRLPRICQRNLMSLL
MAVRPSLPESGLLSVLQIAQQDLAPDPDAWLRALGELLRRDLGVGTSMEGASPLSERC
QRQLQSLCRGLGLGGRRLKSPQAPDPEEEENRDSQQPGKRRKDSEEEAASPEGKRVPK
RLRCWEEEEDHEKERPEHKSLESLADGGSASPIKDQPVMAVKTGEDGSNLDDAKGLAE
SLELPKAIQDQLPRLQQLLKTLEEGLEGLEDAPPVELQLLHECSPSQMDLLCAQLQLP
QLSDLGLLRLCTWLLALSPDLSLSNATVLTRSLFLGRILSLTSSASRLLTTALTSFCA
KYTYPVCSALLDPVLQAPGTGPAQTELLCCLVKMESLEPDAQVLMLGQILELPWKEET
FLVLQSLLERQVEMTPEKFSVLMEKLCKKGLAATTSMAYAKLMLTVMTKYQANITETQ
RLGLAMALEPNTTFLRKSLKAALKHLGP"
BASE COUNT 535 a 725 c 760 g 552 t
ORIGIN
1 cgcgggaacg gctgcggctt cgggcggccg ggtttctccg gtctcccaac gccgaggaga
61 gcttgtaaca ggcgctggag ctggcccgcc accgccgcgt cagggacggc gctggagtcc
121 tccgttcccc tcagcctctg agctgaggcc ccacaccaga gtagggggcg gcgcggcacc
181 cgtgccccgg catggcgaca ccggacgcgg ggctccctgg ggctgagggc gtggagccgg
241 cgccctgggc gcagctggag gcccccgccc gcctcctgct gcaggcgctg caggcggggc
301 ctgagggggc gcggcgcggc ctgggggtgc tccgggcgct gggcagccgc ggctgggagc
361 ccttcgactg gggtcgcttg ctcgaggccc tgtgccggga ggagccggtc gtgcaggggc
421 ctgacggccg tctggagctg aaaccactgt tgctgcgatt gccccggata tgccagagga
481 acctgatgtc cctgctgatg gccgttcggc catcgctgcc ggaaagtggg ctcctctctg
541 tgctgcagat tgcccagcag gacctagccc ctgaccccga tgcctggctc cgtgccctgg
601 gggaattgct gcgaagggat ttgggggtgg ggacctccat ggagggagct tctccactgt
661 ctgaaagatg ccagagacag ctccaaagtc tatgtagggg gctgggcctg gggggcagga
721 ggttgaaatc cccccaggct ccagaccctg aagaagagga gaacagggac tcccagcagc
781 ctgggaaacg cagaaaggac tcagaggaag aggctgccag tcctgagggg aagagggtcc
841 ccaaaagatt acggtgttgg gaagaggaag aagatcatga gaaggagaga cccgaacata
901 agtcactgga atccctggca gatggaggaa gtgcatctcc tattaaggac cagcctgtca
961 tggcagttaa gactggcgag gacggttcga atctggatga tgctaaaggt ctggctgaga
1021 gtttggagtt gcccaaagct atccaggacc agcttcccag gctgcagcag ctgctgaaga
1081 ccttggagga ggggttagag ggattggagg atgccccccc agttgagcta cagcttcttc
1141 acgaatgtag tcccagccag atggacttgc tgtgtgccca gctgcagctc cctcagctct
1201 cagacctcgg tctcctgcgg ctctgcacct ggctgctggc cctttcacct gatctcagcc
1261 tcagcaatgc tactgtgctg accagaagcc tctttcttgg acggatcctc tccttgactt
1321 cctcagcctc ccgcctgctt acaactgccc tgacctcctt ctgtgccaaa tatacatacc
1381 ctgtctgcag cgccctcctt gaccctgtgc tccaggcccc aggcacaggt cctgctcaaa
1441 cagagttact gtgttgcctt gtgaagatgg agtccctgga gccagatgca caggttctaa
1501 tgctgggaca gatcttggag ctgccctgga aggaggaaac tttcttggtg ttgcagtcac
1561 tcctagagcg gcaggtggag atgacccctg agaagttcag tgtcttaatg gagaagctct
1621 gtaaaaaggg gctggcagcc accacctcca tggcctatgc caagctcatg ctgacagtga
1681 tgaccaagta tcaggctaac atcactgaga cccagaggct gggcctggct atggccctag
1741 aacctaacac caccttcctg aggaagtccc tgaaggccgc cttgaaacat ttgggcccct
1801 gaccatccac caagggacca ccctcttggt gctccatcac cagcttcctg aagggcattt
1861 ctttcttcac caccttgtct tgagccctag cctgaggata aaggctgagc ctggccatcc
1921 cagattgcaa ctgcctccct gttacaggct gcatagggaa tattggcttc ccagccagca
1981 gggaggctcc tgggctaagg gagctcagct atattttctt tttcatttct tttgtttttg
2041 agagaaggta ttgctctgtc atccaggctg gagtgcagtg atgcgattga tcatggctca
2101 ctgtaacctc tgcctcccag gctcgatcct cccatgtcag cctcccaagt agctgggact
2161 acatgcacat gacactatgc ccagctaatt ttttattttg tagataatat gctggtcagg
2221 gctggtcttg aactcctgag ctcaagtgat cttcctgcct tggcacccaa agtgttgaga
2281 tttacaggtg tgagccacca caccaggcca gagctatatt tccaaaggct gctggcccca
2341 ggcacactcc tcatcaattc tcaggctgca gggacaaact ttccgatagg gctcagtagg
2401 atcaagccga cccagagtgg gcatgggatg ctccaggagg tctggggtac cagtgggctc
2461 agatgaagct cttgtgctca tgtatattat gaccttctgt gtttttgttt ctgacttgaa
2521 taatttatca atggtgttga ataaaagcaa aaaaaaaaaa aaaaaaaaaa aa
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