LOCUS BC046205 1842 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens ubiquitin specific peptidase 9, X-linked, mRNA (cDNA
clone IMAGE:6175281), partial cds.
ACCESSION BC046205
VERSION BC046205.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1842)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1842)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: m Column: 12.
FEATURES Location/Qualifiers
source 1..1842
/db_xref="H-InvDB:HIT000098325"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6175281"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1842
/gene="USP9X"
/gene_synonym="DFFRX"
/gene_synonym="FAF"
/db_xref="GeneID:8239"
/db_xref="HGNC:HGNC:12632"
/db_xref="MIM:300072"
CDS <1..1424
/gene="USP9X"
/gene_synonym="DFFRX"
/gene_synonym="FAF"
/codon_start=3
/product="USP9X protein"
/protein_id="AAH46205.1"
/db_xref="GeneID:8239"
/db_xref="HGNC:HGNC:12632"
/db_xref="MIM:300072"
/translation="KNVRFWFAHNVLFNVSNRFSEYLLECPSAEVRGAFAKLIVFIAH
FSLQDGPCPSPFASPGPSSQAYDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFV
MYANLGVAEKTQLLKLSVPATFMLVSLDEGPGPPIKYQYAELGKLYSVVSQLIRCCNV
SSRMQSSINGNPPLPNPFGDPNLSQPIMPIQQNVADILFVRTSYVKKIIEDCSNSEET
VKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHN
ALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPVAYQILQGNGDLKRKW
TWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACEL
CPEEEPDDQDAPDEHESPPPEDAPLYPHSPGSQYQQNNHVHGQPYTGPAAHHMNNPQR
TGQRAQENYEGSEEVSPPQTKDQ"
BASE COUNT 550 a 396 c 368 g 528 t
ORIGIN
1 gcaagaatgt acgtttttgg tttgctcata acgtcctttt taatgtttca aatcgcttct
61 ccgaatacct tctggagtgc cctagtgcag aagtgagggg tgcgtttgca aaacttatag
121 tctttattgc acatttttcc ttgcaagatg ggccatgtcc ttcacctttt gcctctcctg
181 gaccttctag tcaggcttat gacaacttaa gcttgagtga tcacttacta agagcagtac
241 taaatctctt gagaagggaa gtttcagagc atgggcgtca tttacagcag tatttcaacc
301 tgtttgtaat gtatgccaat ttaggtgtgg cagagaagac acagcttctg aaattgagtg
361 tacctgctac ttttatgctt gtgtctttag atgaaggtcc aggtcctcca atcaaatacc
421 agtatgctga attaggcaaa ttatactcag tagtgtcaca gctgatccgc tgttgcaatg
481 tctcttcaag aatgcagtct tcaatcaatg gtaatcctcc tcttcccaat ccttttggtg
541 atcctaattt atcacaacct ataatgccaa ttcagcagaa tgtggcagac attttatttg
601 tgagaacaag ttatgtgaag aaaatcattg aagactgcag taattcagag gaaaccgtca
661 aattgcttcg tttttgctgc tgggagaatc ctcagttctc atctactgtc ctcagtgaac
721 ttctctggca ggttgcatat tcctatacct atgaactgcg gccctatttg gatctgcttt
781 tgcaaatctt actgattgag gactcctggc aaactcacag aattcataat gcactgaaag
841 gaattccaga tgaccgagat gggctgtttg acacaatcca gcgctctaag aatcactatc
901 aaaaaagagc ataccagtgt ataaaatgta tggtagctct atttagtaac tgtcctgttg
961 cttaccaaat cctgcagggc aatggagatc ttaaaagaaa gtggacctgg gcagtggaat
1021 ggcttggaga tgaacttgaa agaagaccat atactggcaa tcctcagtac acttacaaca
1081 attggtctcc cccagtgcaa agcaatgaaa cgtccaatgg ttatttcttg gagagatcac
1141 atagtgctag gatgacactt gcaaaagctt gtgaactctg tccagaggag gagccagatg
1201 accaagatgc tccagatgaa catgagtcgc ctccacctga agatgcccca ttgtaccccc
1261 attcacctgg atctcagtat caacagaata accatgtgca tggacagcca tatacaggcc
1321 cagcagcaca tcacatgaac aaccctcaga gaactggcca acgagcacaa gaaaattatg
1381 aaggcagtga agaagtatcc ccacctcaaa ccaaggatca atgaaatgca cataattaac
1441 tggttccatc aagactgtgc acccaggcct tacagtccaa cctttttctg tgtctggcta
1501 atatttaaaa ctagaaaaac tattcctaat caacatggag tggagagttt attcactgtc
1561 ttatctgcag aaatttgctg tcaatatgta acccgcctgc agtggaaagt gtatagtgtt
1621 ttgtaataaa tggcctgatg ctaatgtgta aatggcaaag gtgtatatag tatattaatg
1681 ttgactgtta attcttaagc aagaaacttt tttcttgatg agactcacag atctacacaa
1741 actacaaaag ttaattttct tgttacaccc actgcactct gcaaccagtg ttgcctgcct
1801 catggcagtt ggatcagctc ctttacaaaa aaaaaaaaaa aa
//