LOCUS BC046158 1045 bp mRNA linear HUM 15-FEB-2005
DEFINITION Homo sapiens ST8 alpha-N-acetyl-neuraminide
alpha-2,8-sialyltransferase 1, mRNA (cDNA clone IMAGE:5557348),
complete cds.
ACCESSION BC046158
VERSION BC046158.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1045)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1045)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: g Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28373095
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1045
/db_xref="H-InvDB:HIT000053006"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5557348"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1045
/gene="ST8SIA1"
/gene_synonym="GD3S"
/gene_synonym="SIAT8"
/gene_synonym="SIAT8A"
/gene_synonym="ST8Sia I"
/gene_synonym="ST8SiaI"
/db_xref="GeneID:6489"
/db_xref="MIM:601123"
CDS 440..691
/gene="ST8SIA1"
/gene_synonym="GD3S"
/gene_synonym="SIAT8"
/gene_synonym="SIAT8A"
/gene_synonym="ST8Sia I"
/gene_synonym="ST8SiaI"
/codon_start=1
/product="ST8SIA1 protein"
/protein_id="AAH46158.1"
/db_xref="GeneID:6489"
/db_xref="MIM:601123"
/translation="MSPCGRARRQTSRGAMAVLAWKFPRTRLPMGASALCVVVLCWLY
IFPVYRLPNEKEIVQGVLQQGTAWRRNQTAARAFSCGIA"
BASE COUNT 250 a 274 c 301 g 220 t
ORIGIN
1 gggcgcagga gcatcgctcg gaggggacaa ggggacgcca cgggccacat gtttaggagg
61 gagccgagcc ttctcccgga ccctcgccga gggcgaccgt gatgctgcag aaccggcggg
121 agcgactcgc cgccgccgct ctctgcgcac tcggagaccc cagcgcccgc cttctgcagg
181 ggaagcgacc atggccatag atcgtgactt cacccccagc cacttcccct agaaagaaat
241 ccttggaaaa gttgcatttg aaaaaatcct tgcgctgacc tttggggccg acggggccga
301 agaagcgtgc gtgcgtttgc aagtaagaga accaaaggtg tgtgtgcatg gggggctggc
361 ggtgggggac cctccgctgc cacttcgcct agctttgtgc tgaggccccg gcccccgccc
421 ctgggacgcc ggggctgcga tgagcccctg cgggcgggcc cggcgacaaa cgtccagagg
481 ggccatggct gtactggcgt ggaagttccc gcggacccgg ctgcccatgg gagccagtgc
541 cctctgtgtc gtggtcctct gttggctcta catcttcccc gtctaccggc tgcccaacga
601 gaaagagatc gtgcaggggg tgctgcaaca gggcacggcg tggaggagga accagaccgc
661 ggccagagcg ttcagctgtg gcattgcatg agagggaagc agccaagacc gtaagagctg
721 tgtcgctcta attaggtgcc aggaggaagt ggaaatgaat tcagagccac acattctcca
781 tttttcagat cttaaacaca gaagacacta tcagagattt ccaggtgacc acaatgagaa
841 aagggccttt cgtcccacta catcttgcct gggatgcaaa atctttagtt tgtttccatt
901 attgataaaa taaacatata tagtacatga ttttatgtcc cccatgttca tttaaacaat
961 ttatagtgtt tattatttgt ctgattttgg aaagaataca tatttactat agaaaacttt
1021 taaatgtagt aaaaaaaaaa aaaaa
//