LOCUS BC046123 951 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:57581
IMAGE:3879581), complete cds.
ACCESSION BC046123
VERSION BC046123.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 951)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 951)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC046123.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: a Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538474.
FEATURES Location/Qualifiers
source 1..951
/db_xref="H-InvDB:HIT000052995"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57581 IMAGE:3879581"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..951
/gene="UBB"
/gene_synonym="MGC8385"
/db_xref="GeneID:7314"
/db_xref="HGNC:HGNC:12463"
/db_xref="MIM:191339"
CDS 87..776
/gene="UBB"
/gene_synonym="MGC8385"
/codon_start=1
/product="ubiquitin B"
/protein_id="AAH46123.1"
/db_xref="GeneID:7314"
/db_xref="HGNC:HGNC:12463"
/db_xref="MIM:191339"
/translation="MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV
KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST
LHLVLRLRGGC"
BASE COUNT 271 a 239 c 242 g 199 t
ORIGIN
1 ggctttgttg ggtgagcttg tttgtgtccc tgtgggtgga cgtggttggt gattggcagg
61 atcctggtat ccgctaacag gtcaaaatgc agatcttcgt gaaaaccctt accggcaaga
121 ccatcaccct tgaggtggag cccagtgaca ccatcgaaaa tgtgaaggcc aagatccagg
181 ataaggaagg cattcccccc gaccagcaga ggctcatctt tgcaggcaag cagctggaag
241 atggccgtac tctttctgac tacaacatcc agaaggagtc gaccctgcac ctggtcctgc
301 gtctgagagg tggtatgcag atcttcgtga agaccctgac cggcaagacc atcaccctgg
361 aagtggagcc cagtgacacc atcgaaaatg tgaaggccaa gatccaggat aaagaaggca
421 tccctcccga ccagcagagg ctcatctttg caggcaagca gctggaagat ggccgcactc
481 tttctgacta caacatccag aaggagtcga ccctgcacct ggtcctgcgt ctgagaggtg
541 gtatgcagat cttcgtgaag accctgaccg gcaagaccat cactctggag gtggagccca
601 gtgacaccat cgaaaatgtg aaggccaaga tccaagataa agaaggcatc ccccccgacc
661 agcagaggct catctttgca ggcaagcagc tggaagatgg ccgcactctt tctgactaca
721 acatccagaa agagtcgacc ctgcacctgg tcctgcgcct gaggggtggc tgttaattct
781 tcagtcatgg cattcgcagt gcccagtgat ggcattactc tgcactatag ccatttgccc
841 caacttaagt ttagaaatta caagtttcag taatagctga acctgttcaa aatgttaata
901 aaggtttcgt tgcatggtaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//