LOCUS BC046103 1691 bp mRNA linear HUM 09-MAR-2007 DEFINITION Homo sapiens parvin, beta, mRNA (cDNA clone MGC:57521 IMAGE:5763848), complete cds. ACCESSION BC046103 VERSION BC046103.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1691) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1691) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 107 Row: j Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 51477694. FEATURES Location/Qualifiers source 1..1691 /db_xref="H-InvDB:HIT000052985" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:57521 IMAGE:5763848" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1691 /gene="PARVB" /gene_synonym="CGI-56" /db_xref="GeneID:29780" /db_xref="HGNC:HGNC:14653" /db_xref="MIM:608121" CDS 31..1125 /gene="PARVB" /gene_synonym="CGI-56" /codon_start=1 /product="parvin, beta" /protein_id="AAH46103.2" /db_xref="GeneID:29780" /db_xref="HGNC:HGNC:14653" /db_xref="MIM:608121" /translation="MSSAPRSPTPRPRRMKKDESFLGKLGGTLARKRRAREVSDLQEE GKNAINSPMSPALADVHPEDTQLEENEERTMIDPTSKEDPKFKELVKVLLDWINDVLV EERIIVKQLEEDLYDGQVLQKLLEKLAGCKLNVAEVTQSEIGQKQKLQTVLEAVHDLL RPRGWALRWSVDSIHGKNLVAILHLLVSLAMHFRAPIRLPEHVTVQVVVVRKREGLLH SSHISEELTTTTEMMMGRFERDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVT ELETQFADGVYLVLLMGLLEDYFVPLHHFYLTPESFDQKVHNVSFAFELMLDGGLKKP KARPEDVVNLDLKSTLRVLYNLFTKYKNVE" BASE COUNT 386 a 477 c 486 g 342 t ORIGIN 1 tgcgcccgcc gccggcccca cgcgcggccc atgtcctccg cgccgcgctc gcccaccccg 61 cggccccgca ggatgaagaa ggacgagtcg ttcctgggca agctgggcgg caccctggcc 121 aggaagcgga gggcgcgcga ggtgagtgac ctgcaggaag aaggcaagaa tgccatcaac 181 tcaccgatgt cccccgccct ggcggatgtt caccctgaag acacccagct cgaggagaac 241 gaggagcgca cgatgattga ccccacttcc aaggaagacc ccaagttcaa ggaactggtc 301 aaggtcctcc tcgactggat taatgacgtg ctggtggagg agaggatcat tgtgaagcag 361 ctggaggaag acctgtatga cggccaggtg ctgcagaagc tcttggaaaa actggcaggg 421 tgcaagctga atgtggctga ggtgacacag tccgaaatag ggcagaaaca gaagctgcag 481 acggtgctgg aagcagtaca tgacctgctg cggccccgag gctgggcgct ccggtggagc 541 gtggactcaa ttcacgggaa gaacctggtg gccatcctcc acctgctggt ctctctggcc 601 atgcacttca gggcccccat ccgccttcct gagcatgtaa cggtgcaggt ggtggtcgtg 661 cggaaacggg aaggcctgct gcattccagc cacatctcgg aggagctgac cacaactaca 721 gagatgatga tgggccggtt cgagcgggat gccttcgaca cgctgttcga ccacgccccg 781 gataagctca gcgtggtgaa gaagtctctc atcacttttg tgaacaagca cctgaacaag 841 ctgaatttgg aggtgacgga actggagacc cagtttgcag atggcgtgta cctggttctg 901 ctcatgggcc ttctggaaga ctactttgtt cctctccacc acttctacct gactccggaa 961 agcttcgatc agaaggtcca caatgtgtcc tttgcctttg agctgatgct ggacggaggc 1021 ctcaagaaac ccaaggctcg tcctgaagac gtggttaact tggacctcaa atccaccctg 1081 agggttcttt acaacctgtt caccaagtac aagaacgtgg agtgacgggg gagctgtgga 1141 tggtggcagg agtgtcccag caagaaaggc ggcatccgtc tgtgccctgt gcctttccag 1201 ggagccaggc gccatgggct tctggtccaa gctgtgttga ctgtcatccc caccccaccc 1261 ctacctcacg cctgccccac cccctgcctc ttttggttgt tgttcttaat ctcctctcca 1321 tgtagttccc agtgggcaag agcctttgaa aatgcaggat tctaaacact cgtgcttgcg 1381 tttgaagcct cgcgtcactc agtcgcgtgg gatgatgagt ccgttgttgt ctgccttggc 1441 cgaaagatga aaaaaagcct gaaccccaac ccccagctgg ttgagagcac cctgcattct 1501 gcctcatggt gcagttagcg atcacaggcc ttcagaagta caacatcagc tcagcaggaa 1561 cgccggctcc ccgaggaccc aggcttgacg attcaccggg gatctcctgg gctgggctct 1621 ccttggaagt gaggcctttt attaaaaata aaagggtttt gcagtttgaa aaaaaaaaaa 1681 aaaaaaaaaa a //