LOCUS BC046099 2188 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens TAF15 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 68kDa, mRNA (cDNA clone MGC:57515
IMAGE:6067044), complete cds.
ACCESSION BC046099
VERSION BC046099.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2188)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2188)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: l Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21327699.
FEATURES Location/Qualifiers
source 1..2188
/db_xref="H-InvDB:HIT000052984"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57515 IMAGE:6067044"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2188
/gene="TAF15"
/gene_synonym="hTAFII68"
/gene_synonym="Npl3"
/gene_synonym="RBP56"
/gene_synonym="TAFII68"
/db_xref="GeneID:8148"
/db_xref="HGNC:HGNC:11547"
/db_xref="MIM:601574"
CDS 48..1826
/gene="TAF15"
/gene_synonym="hTAFII68"
/gene_synonym="Npl3"
/gene_synonym="RBP56"
/gene_synonym="TAFII68"
/codon_start=1
/product="TAF15 RNA polymerase II, TATA box binding
protein (TBP)-associated factor, 68kDa"
/protein_id="AAH46099.2"
/db_xref="GeneID:8148"
/db_xref="HGNC:HGNC:11547"
/db_xref="MIM:601574"
/translation="MSDSGSYGQSGGEQQSYSTYGNPGSQGYGQASQSYSGYGQTTDS
SYGQNYSGYSSYGQSQSGYSQSYGGYENQKQSSYSQQPYNNQGQQQNMESSGSQGGRA
PSYDQPDYGQQDSYDQQSGYDQHQGSYDEQSNYDQQHDSYSQNQQSYHSQRENYSHHT
QDDRRDVSRYGEDNRGYGGSQGGGRGRGGYDKDGRGPMTGSSGGDRGGFKNFGGHRDY
GPRTDADSESDNSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTD
KDTGKPKGEATVSFDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMRGGGSGGGR
RGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPEDSRPSGG
DFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDR
SGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGY
GGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGY
GGDRGGYGGKMGGRNDYRNDQRNRPY"
BASE COUNT 663 a 373 c 694 g 458 t
ORIGIN
1 cgttgttctc ggcgggctgt ggggcctccg cgccgcggcc gttagtcatg tcggattctg
61 gaagttacgg tcagtctggg ggtgagcagc aaagttattc tacctatgga aatccaggca
121 gccaaggcta tggacaagca tcacaaagct attctggcta tgggcaaacg actgattcct
181 cttatggaca gaactacagc ggttactcca gttatggaca aagtcagtca ggttattcac
241 agtcctatgg tggttatgag aatcaaaagc agagctcata tagccagcaa ccatataata
301 accagggaca gcagcaaaac atggaatcat caggaagcca aggtggaaga gcaccttcct
361 atgaccagcc agactatggt caacaagatt catatgacca gcagtcaggc tatgatcaac
421 atcaaggctc atatgatgag cagtcaaatt atgatcagca gcatgattcc tatagtcaaa
481 accagcagtc ctatcattca caaagggaaa actacagcca ccacacacaa gatgaccgtc
541 gtgatgtgag taggtatgga gaagataata gaggatatgg cgggtcacag ggaggaggta
601 gagggcgtgg gggatatgac aaggatggaa gaggtcctat gacaggatca agtggtggtg
661 accgcggtgg cttcaaaaat tttggtggtc acagggatta tggacccaga acagatgctg
721 attcagaatc tgataattca gataacaaca caatctttgt gcaaggactt ggggagggtg
781 tgtctacaga tcaagttggg gagttcttta aacaaatagg aattatcaag acaaataaga
841 agaccggaaa accaatgata aatctttata cagacaagga cacaggaaag ccaaaggggg
901 aggcaacagt gtcatttgat gaccctcctt cagctaaggc agccattgac tggtttgatg
961 gaaaagaatt ccatggcaac atcattaaag tgtcctttgc cactagaaga cctgaattca
1021 tgagaggagg tggaagtgga ggtgggcggc gaggccgtgg aggatataga ggtcgtggag
1081 gctttcaagg gagaggtgga gaccccaaaa gtggggattg ggtttgccct aatccgtcat
1141 gcggaaatat gaactttgct cgaaggaatt cctgcaatca gtgcaatgag cctagaccag
1201 aggactctcg tccctcagga ggagatttcc gggggagagg ctacggtgga gagaggggct
1261 acagaggtcg tgggggcaga ggtggagacc gaggcggcta tggtggagac agaagtgggg
1321 gtggctatgg tggagacaga agcagcggtg gtggctacag cggagataga agtgggggcg
1381 gctatggtgg agacagaagt gggggtggct atggtgggga cagaggcggc ggctatggtg
1441 gggacagagg aggcggctat ggaggagacc gaggaggtgg ctatggagga gatcgaggtg
1501 gctatggagg agaccgaggt ggaggctatg gtggagaccg aggaggctat ggaggagatc
1561 gaggaggtta tggaggagat cgaggaggtt atggaggaga tcgaggaggc tatggaggag
1621 acagaagccg ggggggctat ggaggagacc gtggtggtgg cagtggctac ggtggagacc
1681 gaagtggagg ctatggagga gacaggagtg gtggcggcta tggaggagac cgaggtgggg
1741 gctacggagg agaccgaggt ggctatggag gcaaaatggg aggaagaaac gactacagaa
1801 atgatcagcg caaccgacca tactgatgac tgttttgaat gttcctttgt ctctgacatg
1861 atccatagtg aaattgccag agttttgcct gctgctttcc tcgtggcctc ttcttgggta
1921 gtgaaattaa gtgacatttg gatttttatt tgggtgggag ggctgggaca gtttttcttc
1981 tagaaatgtc tgttgagatt tcccccttta gtttccaacc ttctccccaa cccttggagc
2041 taaatgcgtt gtaaaatatt gccaaaatga aaagtgtttt gtaatactgc aataaaggct
2101 gcttgttttt gtggaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//