LOCUS BC046098 1543 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens CBF1 interacting corepressor, mRNA (cDNA clone MGC:57509 IMAGE:5495320), complete cds. ACCESSION BC046098 VERSION BC046098.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1543) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1543) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC046098.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 107 Row: f Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40068058. FEATURES Location/Qualifiers source 1..1543 /db_xref="H-InvDB:HIT000052983" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:57509 IMAGE:5495320" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1543 /gene="CIR" /db_xref="GeneID:9541" /db_xref="MIM:605228" CDS 45..1397 /gene="CIR" /codon_start=1 /product="CBF1 interacting corepressor" /protein_id="AAH46098.1" /db_xref="GeneID:9541" /db_xref="MIM:605228" /translation="MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQ QYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKKENKEKEETEGETEYKFEWQKGA PREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDG SGPSMHPSELIAEMRNSGFALKRNVLGRNLTANDPSQEYVASEGEEDPEVEFLKSLTT KQKQKLLRKLDRLEKKKKKKDRKKKKFQKSRSKHKKHKSSSSSSSSSSSSSSTETSES SSESESNNKEKKIQRKKRKKNKCSGHNNSDSEEKDKSKKRKLHEELSSSHHNREKAKE KPRFLKHESSREDSKWSHSDSDKKSRTHKHSPEKRGSERKEGSSRSHGREERSRRSRS RSPGSYKQRETRKRAQRNPGEEQSRRNDSRSHGTDLYRGEKMYREHPGGTHTKVTQRE " BASE COUNT 619 a 273 c 352 g 299 t ORIGIN 1 tgctaacaga tctagcccct gctttcccta gttccagttc caagatgggg aaatccttcg 61 ccaacttcat gtgcaagaaa gactttcatc ctgcctccaa atccaatatc aaaaaagtat 121 ggatggcaga acagaaaata tcatatgata agaagaaaca agaagaattg atgcagcaat 181 atcttaaaga acaagaatca tatgataata gattgcttat gggagatgaa cgtgtaaaga 241 atggccttaa tttcatgtat gaagccccac caggagctaa aaaagaaaac aaagagaaag 301 aagaaacaga aggagagacc gaatacaaat ttgaatggca gaaaggagcc ccacgagaaa 361 aatatgccaa agatgacatg aacatcagag atcagccctt tggtattcag gttcgaaatg 421 tgaggtgcat taaatgtcac aaatggggtc atgtcaacac agatcgagaa tgtcctttgt 481 ttggtctttc tggaatcaat gcaagttcgg ttcccactga tggctcaggg ccatcgatgc 541 acccctcgga gctaatagcg gagatgagaa acagtgggtt tgcactgaaa cgaaatgtac 601 tggggagaaa cttgaccgca aatgatccat cacaggagta tgttgcaagt gagggtgaag 661 aagatccaga agttgaattt ttaaagtcac taacaaccaa acaaaaacag aaacttctca 721 ggaaattaga tcgactggag aagaaaaaaa agaaaaaaga tagaaaaaag aaaaagtttc 781 agaagagcag aagtaaacac aaaaaacata agtcctcttc ttcctcatct tcctcctcct 841 cctcctcttc ctctactgag acttcagaaa gcagtagtga gagtgagagt aacaataaag 901 aaaaaaaaat acaaaggaag aaaagaaaga aaaacaagtg ttcagggcat aacaacagtg 961 attctgaaga gaaggacaag tctaagaaga gaaagcttca tgaagaactt tctagcagtc 1021 accataaccg ggaaaaagcc aaggaaaagc ccaggttctt aaaacacgag agttctaggg 1081 aggacagcaa atggagccat tctgattctg acaaaaagtc cagaacccat aaacatagcc 1141 cagagaagag aggctctgaa agaaaggagg ggagcagcag aagccacggc agggaggaaa 1201 ggagccggag aagccggagc agaagtcctg gtagttacaa gcaaagggag acaaggaaac 1261 gggcacagcg aaatcctggt gaagagcaaa gcagaagaaa tgacagcaga agccatggca 1321 cagacttgta tagaggagaa aaaatgtaca gagagcaccc aggaggtaca catactaaag 1381 tgacacaaag agaatgaagc agaagtagag aagaaagact gtatgtgaca attacctggg 1441 aataaaaata tctccacttt tttattgaat acctttagca aggggtaaat tatgtactgt 1501 tgtctttcta ataaaaaagc tcaattttaa aaaaaaaaaa aaa //