LOCUS BC045762 1660 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens empty spiracles homeobox 1, mRNA (cDNA clone MGC:48662
IMAGE:5260039), complete cds.
ACCESSION BC045762
VERSION BC045762.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1660)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1660)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: m Column: 8.
FEATURES Location/Qualifiers
source 1..1660
/db_xref="H-InvDB:HIT000052973"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48662 IMAGE:5260039"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1660
/gene="EMX1"
/db_xref="GeneID:2016"
/db_xref="HGNC:HGNC:3340"
/db_xref="MIM:600034"
CDS 379..1251
/gene="EMX1"
/codon_start=1
/product="empty spiracles homeobox 1"
/protein_id="AAH45762.2"
/db_xref="GeneID:2016"
/db_xref="HGNC:HGNC:3340"
/db_xref="MIM:600034"
/translation="MCLAGCTPRKAAAPGRGALPRARLPRTAPAAATMFQPAAKRGFT
IESLVAKDGGTGGGTGGGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAA
AAAGAGRSLYGGPELVFPEAMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYP
WVLRNRFFGHRFQASDVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVV
GAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQKKKGSHHINRWRIAT
KQANGEDIDVTSND"
BASE COUNT 266 a 584 c 558 g 252 t
ORIGIN
1 aggtgagcgg cggccaatgg gcgagcgcgg ggcaggtgcc cgctaactcg cgcctcgcag
61 cgctgggcgg ccggggctgg gcagggcagt gcggggacac cgggggctgg ggtcggtccc
121 agcgggactc cgaaaggagg gagacgagct caaccctcgg gccttactgg cagctcgcag
181 cctagcacgg agcccgcgcc tgtgcgggcg cctggagctg cccgctccgc cgcagcagcc
241 gccgcgcctg gccgtacgct gtggccggac cccgcggtcg ctcgctcaca cacccctcgc
301 cgctccgcgc ctggctcgcc cgcgggggcc gagcgcgagc gggcgggcgg gggaggtgag
361 gggtgcgggc gggtgtgcat gtgcctggct gggtgcacac cccgcaaggc ggcggcgcca
421 ggacgcggag cgctccccag agcacggctg cctcgcacag ctcccgcggc tgcgaccatg
481 ttccagcccg cggccaagcg cggctttacc atagagtcct tggtggccaa ggacggcggc
541 accggcgggg gcactggcgg cgggggcgcg ggctcccatc tcctggcggc ggccgcctcc
601 gaggaaccgc tccggcccac ggcgctcaac taccctcacc ccagcgcggc cgaggcggcc
661 ttcgtgagtg gcttccctgc cgcggccgcc gcgggcgcgg gccgctcgct ctacggtggg
721 cccgagctcg tgttccccga ggccatgaac caccccgcgc tgaccgtgca tccggcgcac
781 cagctgggcg cctccccgct gcagcccccg cactccttct tcggcgccca gcaccgggac
841 cctctccatt tctacccctg ggtcctgcgg aaccgcttct tcggccaccg cttccaggcc
901 agcgacgtgc cccaggacgg gctgcttctg cacggcccct tcgcacgcaa gcccaagcgg
961 atccgcacgg ccttctcgcc ctcgcagctg ctgcggctgg agcgcgcctt cgagaagaac
1021 cactacgtgg tgggcgccga gcggaagcag ctggccggca gtctcagcct ctccgagacg
1081 caggtgaagg tgtggttcca gaaccggagg acaaagtaca aacggcagaa gctggaggag
1141 gaagggcctg agtccgagca gaagaagaag ggctcccatc acatcaaccg gtggcgcatt
1201 gccacgaagc aggccaatgg ggaggacatc gatgtcacct ccaatgacta gggtgggcaa
1261 ccacaaaccc acgagggcag agtgctgctt gctgctggcc aggcccctgc gtgggcccaa
1321 gctggactct ggccactccc tggccaggct ttggggaggc ctggagtcat ggccccacag
1381 ggcttgaagc ccggggccgc cattgacaga gggacaagca atgggctggc tgaggcctgg
1441 gaccacttgg ccttctcctc ggagagcctg cctgcctggg cgggcccgcc caccaccgca
1501 gcctcccagc tgctctccgt gtctccaatc tcccttttgt tttgatgcat ttctgtttta
1561 atttattttc caggcaccac tgtagtttag tgatccccag tgtccccctt ccctatggga
1621 ataataaaag tctctctctt aatgaaaaaa aaaaaaaaaa
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