LOCUS BC045742 2450 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens SH3 domain containing 19, mRNA (cDNA clone
IMAGE:5259828), partial cds.
ACCESSION BC045742
VERSION BC045742.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2450)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2450)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: l Column: 3.
FEATURES Location/Qualifiers
source 1..2450
/db_xref="H-InvDB:HIT000098172"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5259828"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2450
/gene="SH3D19"
/gene_synonym="EBP"
/gene_synonym="EVE1"
/gene_synonym="Kryn"
/gene_synonym="SH3P19"
/db_xref="GeneID:152503"
/db_xref="HGNC:HGNC:30418"
/db_xref="MIM:608674"
CDS <1..628
/gene="SH3D19"
/gene_synonym="EBP"
/gene_synonym="EVE1"
/gene_synonym="Kryn"
/gene_synonym="SH3P19"
/codon_start=2
/product="SH3D19 protein"
/protein_id="AAH45742.1"
/db_xref="GeneID:152503"
/db_xref="HGNC:HGNC:30418"
/db_xref="MIM:608674"
/translation="IGEQKDELSFSEGEIIILKEYVNEEWARGEVRGRTGIFPLNFVE
PVEDYPTSGANVLSTKVPLKTKKEDSGSNSQVNSLPAEWCEALHSFTAETSDDLSFKR
GDRIQILERLDSDWCRGRLQDREGIFPAVFVRPCPAEAKSMLAIVPKGRKAKALYDFR
GENEDELSFKAGDIITELESVDDDWMSGELMGKSGIFPKNYIQFLQIS"
BASE COUNT 803 a 423 c 472 g 752 t
ORIGIN
1 aattggagag cagaaggatg agttgagttt ctcagaggga gaaattatta ttcttaaaga
61 gtatgtgaat gaggaatggg ccagaggaga agttcgaggc agaactggga ttttccccct
121 gaactttgtg gagcctgttg aggattatcc cacctctggt gcaaatgttt taagcacaaa
181 ggtaccactg aaaaccaaaa aagaagattc tggctcaaac tctcaggtta acagtcttcc
241 ggcagaatgg tgtgaagctc ttcacagttt tacagcagag accagtgatg acttatcatt
301 caagagggga gaccggatcc agattctgga acgtctggat tctgactggt gcaggggcag
361 actgcaggac agggagggga tcttcccagc agtgtttgtg aggccctgcc cagctgaggc
421 aaaaagtatg ttggccatag taccgaaggg gaggaaggcc aaagccttat atgatttccg
481 aggggagaat gaagatgaac tttccttcaa ggctggagat ataataacag agctggaatc
541 tgtagatgat gactggatga gtggagaact tatgggaaaa tctggaatat ttcccaaaaa
601 ctacatacag tttctacaga tcagctagag gagaagcttg tctgtgttcc ttggcacaag
661 aactcacttg aactatcacc ttgactatca gatatgtttt tgcactattt tttttaactg
721 aaaaagaaat atctaagctg tacatggtac actagaattt tctgaaagca gaaaacgttc
781 agattttgta gttaattttc attacaatag aaacatgcac atggaaaccc atgagctagg
841 attctaccga ggaaaacatc tagtgggatt agcaaggtga agggaaagca tctggtggca
901 tggcagcatg gggaggctca cacacagaag ttgcacgtgg acatctgttt taatcagcac
961 aagtgaatta accatgcttc ttcatttttt tactttagtt aaaaaagagg acatttaata
1021 ttctacatgc tgtaactatc aggacatggt tagcaatctc aatttcattt ttgatattca
1081 aattaattct tacagcttga gcatatcagc cttattacca gagcaaatcc ttccttcaga
1141 tgggatagtt tactgactag ttggagcatt tgtaagcaca tggtgaaatc agcccctgcc
1201 caccaaaata atctttatgt taccaagtga ttccaatttg tctaaggatt tgaagggggt
1261 ctaaattgga tgtatcttag tctaaagaac caaaaccatc cctgaaatgc cttgctaata
1321 caactaatcc ttccatatat gtgccatact tatttttttc ctcagtgtat actttatgtt
1381 aacagggtta ttacaaagca cattttctga atctgcaatc attcctttga caattactgg
1441 acccaaagga aaattcattt tctttgcatt attccagtaa tatataaaaa ctgtgtcttg
1501 ttatagtagt acattatgaa tcacatataa aatcttacaa tacagaacaa ctgttaagat
1561 ggaaaacagt gccaaacctc cacagctcat ttctttgtaa tataatcaga atgaaaaata
1621 atttaagagg acagaagact ggtacttttt tgttttattt tttctctagc ttatccctgc
1681 acaattatta gagtgaatga aaaaccactt tcctgctttc cattgttata aattctaagc
1741 ttaagataaa agtggttctt tacatgactg aatcaattac aatttatggg ctagagccaa
1801 ataggttgaa gacaatcatc caaacagatc aatggaatag aatttcattg gaaatgtaaa
1861 acactttccc aacaatggtc atgactttct tctgtttttg agaagagttt catatgctgg
1921 accacatttt agcttttatt gttttttttt tcccattgtc caaaaagtta agcaacaagt
1981 ggccacactt ttacgtgact acaacctgga gttctgcaaa gaaggtaata tttacttggt
2041 ctttgactaa agttatctcc ccattctatg gttacatttt attttggact atggggactt
2101 ctaatacgtt ttggtaaaga agagagtata aagaaaattc ttgtcaaatt tcactcaaaa
2161 gtaatttcat gagaaatcaa tgatttaaag cattatccaa attaaattat catttgcagc
2221 aaactgtaca acagcaggaa ggatatggaa tggaacatga ggtatatatc tttgccttta
2281 taattttaac atcttatatt gaagattctg aaaacctatc tttattagag gaaaatctca
2341 atcttcagtt ttggccttct gtcaccagaa tgataagtgc aatagttgta aatctacttg
2401 acactgtaat aaactgaact gaactttcaa agtcaaaaaa aaaaaaaaaa
//