LOCUS BC045649 4566 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens zinc finger protein 546, mRNA (cDNA clone MGC:43537 IMAGE:5268795), complete cds. ACCESSION BC045649 VERSION BC045649.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4566) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4566) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 74 Row: g Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31341741. FEATURES Location/Qualifiers source 1..4566 /db_xref="H-InvDB:HIT000052958" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:43537 IMAGE:5268795" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4566 /gene="ZNF546" /gene_synonym="MGC43537" /db_xref="GeneID:339327" /db_xref="HGNC:HGNC:28671" CDS 171..2681 /gene="ZNF546" /gene_synonym="MGC43537" /codon_start=1 /product="zinc finger protein 546" /protein_id="AAH45649.1" /db_xref="GeneID:339327" /db_xref="HGNC:HGNC:28671" /translation="MQVDPPLHGPPNDFLIFQIIPLHSLSIMPRFLWILCFSMEETQG ELTSSCGSKTMANVSLAFRDVSIDLSQEEWECLDAVQRDLYKDVMLENYSNLVSLGYT IPKPDVITLLEQEKEPWIVMREGTRNWFTDLEYKYITKNLLSEKNVCKIYLSQLQTGE KSKNTIHEDTIFRNGLQCKHEFERQERHQMGCVSQMLIQKRISHPLHPKIHAREKSYE CKECRKAFRQQSYLIQHLRIHTGERPYKCMECGKAFCRVGDLRVHHTIHAGERPYECK ECGKAFRLHYHLTEHQRIHSGVKPYECKECGKAFSRVRDLRVHQTIHAGERPYECKEC GKAFRLHYQLTEHQRIHTGERPYECKVCGKTFRVQRHISQHQKIHTGVKPYKCNECGK AFSHGSYLVQHQKIHTGEKPYECKECGKSFSFHAELARHRRIHTGEKPYECRECGKAF RLQTELTRHHRTHTGEKPYECKECGKAFICGYQLTLHLRTHTGEIPYECKECGKTFSS RYHLTQHYRIHTGEKPYICNECGKAFRLQGELTRHHRIHTCEKPYECKECGKAFIHSN QFISHQRIHTSESTYICKECGKIFSRRYNLTQHFKIHTGEKPYICNECGKAFRFQTEL TQHHRIHTGEKPYKCTECGKAFIRSTHLTQHHRIHTGEKPYECTECGKTFSRHYHLTQ HHRGHTGEKPYICNECGNAFICSYRLTLHQRIHTGELPYECKECGKTFSRRYHLTQHF RLHTGEKPYSCKECGNAFRLQAELTRHHIVHTGEKPYKCKECGKAFSVNSELTRHHRI HTGEKPYQCKECGKAFIRSDQLTLHQRNHISEEVLCIM" BASE COUNT 1525 a 852 c 921 g 1268 t ORIGIN 1 gttattattc acttgcgggc gagaagtccg agctagggat cctgaaaagg agggaacaat 61 tgttgtagca ggtctaaaag ttcaggtcca ggaaatggaa acattgcttt gcttttcctg 121 aattgtccag tgacctatcc caggccttcc tttccagtga acaatggacc atgcaggtgg 181 accctcctct tcacgggcct ccaaatgact ttctcatttt tcaaatcatt cctctgcact 241 cactttctat aatgccccgg tttctctgga ttctgtgctt ctccatggag gaaactcaag 301 gagaactgac aagttcttgt ggttctaaaa ccatggccaa tgtatctttg gcatttaggg 361 atgtgtccat agacctctcc caagaggagt gggagtgcct ggacgctgtg cagagggact 421 tgtacaagga tgtgatgttg gagaactaca gcaacctggt ctcactggga tataccattc 481 ctaagccaga tgtgattact ttattggagc aagagaaaga gccctggata gtaatgaggg 541 aagggacaag gaattggttc acagatttgg aatacaagta tattaccaag aatttgcttt 601 cagaaaagaa tgtttgcaaa atctatttat ctcaattgca gacaggggaa aaaagtaaaa 661 acaccatcca tgaggacacc attttcagaa atggtttgca gtgtaaacat gaatttgaga 721 gacaagagag acatcagatg ggatgcgtta gtcaaatgct aatccaaaaa cgaatatctc 781 atcctctaca tccaaaaatt catgctagag agaaatcata tgaatgtaag gaatgtagaa 841 aggcctttag acaacagtca taccttattc aacatctgag aattcacact ggtgagagac 901 cctataaatg tatggaatgt ggaaaggcct tttgtcgagt gggagacctt agagtacatc 961 acacaatcca tgctggggag agaccctatg aatgtaaaga atgtgggaag gcctttagac 1021 ttcattatca ccttactgaa catcagagaa tacattctgg tgtgaaaccc tacgagtgta 1081 aggaatgtgg gaaagccttt agtcgtgtta gagaccttag agtacatcag acaattcatg 1141 ctggagagag accttatgaa tgtaaagaat gtgggaaggc ctttagactt cattatcaac 1201 taactgaaca tcaaagaatt catactggtg agaggcctta tgaatgtaag gtttgtggca 1261 agacctttag ggtacaacga catattagtc aacatcagaa aattcatact ggtgtcaaac 1321 cctataaatg taatgaatgt gggaaggcct ttagtcatgg ctcatacctt gttcaacatc 1381 agaaaattca tactggtgaa aaaccctacg aatgtaaaga atgtggtaag tcctttagtt 1441 ttcatgcaga acttgctcga caccgtagaa ttcatactgg tgagaaaccc tatgaatgta 1501 gagaatgtgg aaaagccttt cgtcttcaaa cggaacttac tcggcatcat agaactcata 1561 ctggtgagaa accctatgaa tgtaaggaat gtgggaaggc ctttatttgt ggttatcaac 1621 ttactttaca tctgagaact cacaccggtg agattcccta tgaatgtaag gaatgtggaa 1681 aaaccttcag tagtcgctat catctcactc aacactacag aattcatact ggtgagaaac 1741 cctacatatg taacgaatgt ggaaaagcct ttcgtcttca aggagaactt acccgacatc 1801 acagaattca tacatgtgag aaaccctatg aatgtaagga atgtgggaag gcttttattc 1861 atagcaatca atttatttca caccagcgaa ttcacaccag tgagagcacc tacatatgta 1921 aagaatgtgg gaagattttt agtcgtcgct ataatcttac tcaacatttt aaaattcata 1981 ctggtgaaaa accctacata tgtaatgaat gtgggaaagc ctttcgattt caaacagaac 2041 ttactcagca tcacagaatt catactggtg aaaaacccta taaatgtacg gaatgtggga 2101 aggcctttat tcgtagcact catctcacgc aacatcacag aattcatact ggtgagaaac 2161 cctacgaatg tacggaatgt gggaagacgt ttagtcggca ctatcatctt actcaacatc 2221 acagaggcca tactggtgag aagccctaca tatgtaatga atgtgggaat gcttttattt 2281 gcagttatcg acttacatta catcaaagaa ttcacactgg tgagcttcca tatgaatgta 2341 aggaatgtgg aaagaccttt agtcgtcggt atcatcttac tcaacatttt agacttcata 2401 ctggtgagaa accttatagc tgtaaagaat gtgggaatgc ctttcgtctt caagcagaac 2461 ttactcgaca tcacatagtt cacacgggtg agaaacccta taaatgtaaa gaatgtggga 2521 aagccttcag tgttaattca gaacttactc gacatcacag aattcatact ggtgaaaaac 2581 cctatcaatg taaagaatgt ggaaaagcct ttattcgtag tgatcaactt actttacatc 2641 agagaaatca tattagtgag gaagtcctat gcataatgta aagagaatac gatggccttt 2701 agaaaatgcc ctttagcaga gaatttgtaa tttaagaaat tttctgtttg ttacggaaca 2761 tgtgggaatc ccttttactt catgctcaca atttatcaga aattatttcg tatgttaaag 2821 agtcgaaaga ctatagcatc actcagtccc tgttagactt tagaagattg atactgatgc 2881 actgcatccc aaaccatcag ggccttttcc cctacaaact gttgttgaac agtgcttctc 2941 taaaatgcaa taataatggg ccaggtgaag tggctcacac ctgtaatccc agcactgtgg 3001 aaagacagga gttcgaaacc agcctgggca acatagtgag accctgcctc atggctttag 3061 tgagccatga ttgtgccact gcactccagc ttggtgacag agtgagatcc tgtctctaaa 3121 taaataaata aaatgcgggc caggcacagt ggctcacacc tgtaatccca gcactatggg 3181 aggcccaggt gagcagatca cctgaggtca ggagttcaag accagcctgg ccaacatggt 3241 gaaacccctt ctctactaaa atacacaaat tagctaggca ttgtgggggg tgcctgtaat 3301 cccagctact caggaggctg aggcaggaaa attgcatgaa cctaagtggc agaggttgca 3361 gtgagctgag atcgcaccac tgcactctag cttgggcaac agagcaagac tctgtctctt 3421 aaataaataa ataaatagat taccagaaaa atgaaaagaa aaaaacagac atacaaaata 3481 aaagccccag ttttttatta tggtatttaa ctgagttaac tctgtcagat tgctgcaaac 3541 atttctaaat acttgctctt ggtatctata acttttgcag agaccagaag caaacaattt 3601 gtgggccagt gtcaacacat ggaccacact ttatatagca ctgtaacgga aaatgattct 3661 gttaatgtaa tgaacatggg aaagaccagc cttggcctat ctttatgata tatataaata 3721 atataattct cataattcca cctctgccta tgtggtgttt ggcaaaacat gcccctgtgc 3781 cttggttttt aaaatggtaa taacagtacc acctaatagt atttttgtga ggatgaaatg 3841 ctaataaaag ataaaacctt taaaagagta tttggcacac agcattttat caataaatat 3901 tgctttattt ttttcattgg ggatacattt agtacattca tgtgagagga aggccctgtg 3961 ggtgtaagaa atttgtaaaa actgtccatt acctttcact ccttatttag attggaataa 4021 ttaactggag ataatatcca gtaaaataga ttaaacttcc atttataaag tcagaaccta 4081 tctctgaaaa ttaatgtgag aaagaaatct ctagatttga tgggtgtgaa gattatgaga 4141 gtaaagtttt gaagactcag ggatagctgt aatgcttttt tctttttata acccaaaaag 4201 caggtatgtc agtcgctttt tctgcccaca atgataaatt aaaaacagcc actatccatt 4261 tggaaaactt aaaagaataa tgaacagtta tgttctatct agattcagca attgttaata 4321 tgttgtcaca tttggtttgc ttatacataa tatttacata ttttgctgta gtatttgagt 4381 ataaattgca gatactataa cacatcacat ctaagaataa aggctgcctc ctacttaatt 4441 gctatataac aattgtccaa cctgtctgtg ccccagggca gctttgaatg cagtccaaca 4501 gaaattaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaag aaaaaaaaaa 4561 aaaaaa //