LOCUS BC045639 4127 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens SUMO1/sentrin specific peptidase 1, mRNA (cDNA clone
MGC:41833 IMAGE:5298667), complete cds.
ACCESSION BC045639
VERSION BC045639.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4127)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4127)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 77 Row: a Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45505133.
FEATURES Location/Qualifiers
source 1..4127
/db_xref="H-InvDB:HIT000052953"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41833 IMAGE:5298667"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4127
/gene="SENP1"
/gene_synonym="SuPr-2"
/db_xref="GeneID:29843"
/db_xref="HGNC:HGNC:17927"
CDS 397..2331
/gene="SENP1"
/gene_synonym="SuPr-2"
/codon_start=1
/product="SUMO1/sentrin specific peptidase 1"
/protein_id="AAH45639.2"
/db_xref="GeneID:29843"
/db_xref="HGNC:HGNC:17927"
/translation="MDDIADRMRMDAGEVTLVNHNSVFKTHLLPQTGFPEDQLSLSDQ
QILSSRQGHLDRSFTCSTRSAAYNPSYYSDNPSSDSFLGSGDLRTFGQSANGQWRNST
PSSSSSLQKSRNSRSLYLETRKTSSGLSNSFAGKSNHHCHVSAYEKSFPIKPVPSPSW
SGSCRRSLLSPKKTQRRHVSTAEETVQEEEREVYRQLLQMVTGKQFTIAKPTTHFPLH
LSRCLSSSKNTLKDSLFKNGNSCASQIIGSDTSSSGSASILTNQEQLSHSVYSLSSYT
PDVAFGSKDSGTLHHPHHHHSVPHQPDNLAASNTQSEGSDSVILLKVKDSQTPTPSST
FFQAELWIKELTSVYGSRARERLRQIEEQKALALQLQNQRLQEREHSVHDSVELHLRV
PLEKEIPVTVVQETQKKGHKLTDSEDEFPEITEEMEKEIKNVFRNGNQDEVLSEAFRL
TITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFFTKLKTAGYQA
VKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEACRILLQY
LKQESIDKKRKEFDTNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQ
QHMPYFRKRMVWEILHRKLL"
BASE COUNT 1200 a 910 c 814 g 1203 t
ORIGIN
1 gaggacgttc cttctggtct ctctctcctg ggccgcggag agaccgtctc cctgccgtta
61 cagcaggccc catcccagcg cccagccgta cttggggaaa ggccggttgc gattccgggg
121 ctttcccgcc agagctgggt cttctctggg gagagctgtt ttcaccggga agctcggctt
181 tctgtggtac cggcttcatc tcccgccttc cttgagaccc gagtgatatt tcttgactac
241 ttctgcgtct cacgtaaaca tttctccaac tctcctactc tgtggtatct ccctgagatg
301 tgatatcgct agtgccacca tcagaaagaa acgtctggac cctcctgctc aggactttgt
361 atctttgcta aagtcagtga tgtgaaaaga cttgaaatgg atgatattgc tgataggatg
421 aggatggatg ctggagaagt gactttagtg aaccacaact ccgtattcaa aacccacctc
481 ctgccacaaa caggttttcc agaggaccag ctttcgcttt ctgaccagca gattttatct
541 tccaggcaag gacatttgga ccgatctttt acatgttcca caagaagtgc agcttataat
601 ccaagctatt actcagataa tccttcctca gacagttttc ttggctcagg cgatttaaga
661 acctttggcc agagtgcaaa tggccaatgg agaaattcta ccccatcgtc aagctcatct
721 ttacaaaaat caagaaacag ccgaagtctt tacctcgaaa cccgaaagac ctcaagtgga
781 ttatcaaaca gttttgcggg aaagtcaaac catcactgcc atgtatctgc atatgaaaaa
841 tcttttccta ttaaacctgt tccaagtcca tcttggagtg gttcatgtcg tcgaagtctc
901 ttgagcccca agaaaactca gaggcgacat gttagtacag cagaagagac agttcaagaa
961 gaagaaagag aggtttacag acagctgcta cagatggtca cagggaaaca gtttactata
1021 gccaaaccca ccacacattt tcctttacac ctgtctcgat gtcttagttc cagtaaaaat
1081 actttgaaag actcactgtt taaaaatgga aactcttgtg catctcagat cattggctct
1141 gatacttcat catctggatc tgccagcatt ttaactaacc aggaacagct gtcccacagt
1201 gtatattccc tatcttctta taccccagat gttgcatttg gatccaaaga ttctggtact
1261 cttcatcatc cccatcatca ccactctgtt ccacatcagc cagataactt agcagcttca
1321 aatacacaat ctgaaggatc agactctgtg attttactga aagtgaaaga ttcccagact
1381 ccaactccca gttctacttt cttccaggca gagctgtgga tcaaagaatt aactagtgtt
1441 tatggttctc gagcacgaga aagattgcgc cagattgaag aacagaaggc attggcctta
1501 cagcttcaaa accagagatt gcaggagcgg gaacattcag tacatgattc agtagaacta
1561 catcttcgtg tacctcttga aaaggagatt cctgttactg ttgtccaaga aacacaaaaa
1621 aaaggtcata aattaactga tagtgaagat gaatttcctg aaattacaga ggaaatggag
1681 aaagaaataa agaatgtatt tcgtaatggg aatcaggatg aagttctcag tgaagcattt
1741 cgcctgacca ttacacgcaa agatattcaa actctaaacc atctgaattg gctcaatgat
1801 gagatcatca atttctacat gaatatgctg atggagcgaa gtaaagagaa gggcttgcca
1861 agtgtgcatg catttaatac ctttttcttc actaaattaa aaacggctgg ttatcaggca
1921 gtgaaacgtt ggacaaagaa agtagatgta ttttctgttg acattctttt ggtgcccatt
1981 cacctgggag tacactggtg tctagctgtt gtggacttta gaaagaagaa tattacctat
2041 tacgactcca tgggtgggat aaacaatgaa gcctgcagaa tactcttgca atacctaaag
2101 caagaaagca ttgacaagaa aaggaaagag tttgacacca atggctggca gcttttcagc
2161 aagaaaagcc aggagattcc tcagcagatg aatggaagtg actgtgggat gtttgcctgc
2221 aaatatgctg actgtattac caaagacaga ccaatcaact tcacacagca acacatgcca
2281 tacttccgga agcggatggt ctgggagatc ctccaccgaa aactcttgtg aagactgtct
2341 cacttagcag accttgacca tgtgggggac cagctctttg ttgtctacag ccagagacct
2401 tggaaacagc tgctccaagc cctctgctgt tgtaacaccc ttgatcctgg accaggccct
2461 ggcgagatgc attcacaagc acatctgcct ttccttttgt atctcagata ctatttttgc
2521 aaagaaactt tggtgctgtg aaaggggtga gggacatccc taagctgaag agagagactg
2581 cttttcactt cttcagttct gccatcttgt tttcaaaggg ctccagcctc actcagtccc
2641 taattatggg actgagaaaa gcttggaaag aatcttggtt tcatataaat tcttgttgtt
2701 aggccttact aagaagtagg aaagggcatg ggcaaaaggt agggataaaa accaccagca
2761 tatacatgga catacacaca cacccacaca cacaaacaca cacacacaca caattttcac
2821 gatgtatggt caggaatgtg actgtaaact ggactttggg gcccaggcat aagtcccttc
2881 ctccaggacc tttcctattt atatgtccct atacaaaatc catctgcttt tatacgtagc
2941 tgttttatca tctgtagctt catcctatcc ggaggcacag cacatgagcc ctggacaggt
3001 cccaaagttc caagcagtcc tttccgtaaa agcaggggtt tgcatgtgct accaacacat
3061 gatacgggga agacccaccc agggagcggt ttcagtggcg caacaaagca ccacttttac
3121 tgttgcctac ttctgaccaa gaagaaaaag gaccttagta tttagcataa aattccagcg
3181 ctggatgaat gcagatctag tttggtctgt ggctagttta aatatgtttc taaccacaga
3241 gaatttcata tatatataca tatatatata cacatacata tatatatata tatgtatgta
3301 taaaatttca cagggatatg cttttttttt taaagactga atgtgttcac catttagcct
3361 gtagatttat ttccattttc caaattccag cacacagaga tcccagcccc tatgagtagg
3421 gtgtttgtgg actacctaat ggaatatttt tgaggcctgg atgaactttg ccatatgggt
3481 agaggttaca gagggaggtg atattttcag ctaaaaaaaa aaacgggtgg agtttggact
3541 gatcaacttg agatttaaaa actgctattc cttttgttct ttctagcatc tctccccacc
3601 ctctgagagc tcctcaggct tagatagtga agtgatcaaa tgccagtgtc attttgtact
3661 taagttccaa agtaggaaca ttttatactt ttttctgtat tgtaataggt agttttgtat
3721 gaaatctttt ctcctctccc gttgtactgc attctttcca gcattgtgct ttttccctgg
3781 gcttatttga aaattttact gttttataca agctcgttta gtacattttt ctatgtttta
3841 ccacaagtta caatttgaaa agaaaactat tttttttaaa tattccattg ttaactgaat
3901 gttactgttt ccactccagc aactacatgt cctcccttca actgcctgcc ttttggggaa
3961 agaccacctt ttgtgtgttt gttttttctc tctctttctt tccctttctc tttctatctc
4021 tctttatttt tctttctttt tctttgtttt tgagttttct ataggaaata aatagctttc
4081 tatataaaaa aaaaaaaaaa aaaaaaaaaa gaaaaaaaaa aaaaaaa
//