LOCUS BC045583 4471 bp mRNA linear HUM 23-NOV-2007
DEFINITION Homo sapiens peptidase M20 domain containing 2, mRNA (cDNA clone
IMAGE:5262663), partial cds.
ACCESSION BC045583
VERSION BC045583.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4471)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4471)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: i Column: 2.
FEATURES Location/Qualifiers
source 1..4471
/db_xref="H-InvDB:HIT000098061"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5262663"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..4471
/gene="PM20D2"
/gene_synonym="bA63L7.3"
/db_xref="GeneID:135293"
/db_xref="HGNC:HGNC:21408"
CDS <1..1157
/gene="PM20D2"
/gene_synonym="bA63L7.3"
/codon_start=3
/product="PM20D2 protein"
/protein_id="AAH45583.1"
/db_xref="GeneID:135293"
/db_xref="HGNC:HGNC:21408"
/translation="YEEHHAHRVLTHFFEREPPAASWAVQPHYQLPTAFRAEWEPPEA
RAPSATPRPLHLGFLCEYDALPGIGHACGHNLIAEVGAAAALGVRGALEGLPRPPPPV
KVVVLGTPAEEDGGGKVDLIEAGAFTNLDVVFMANPSQENAAYLPDMAEHDVTVKYYG
KASHSASYPWEGLNALDAAVLAYNNLSVFRQQMKPTWRVHGIIKNGGVKPNIIPSYSE
LIYYFRAPSMKELQVLTKKAEDCFRAAALASGCTVEIKGGAHDYYNVLPNKSLWKAYM
ENGRKLGIEFISEDTMLNGPSGSTDFGNVSFVVPGIHPYFHIGSNALNHTEQYTEAAG
SQEAQFYTLRTAKALAMTALDVIFKPELLEGIREDFKLKLQEEQFVNVVE"
BASE COUNT 1335 a 800 c 889 g 1447 t
ORIGIN
1 gctacgagga gcaccatgcc caccgcgtgc tgacgcactt cttcgagcgg gagccgcccg
61 cggcctcctg ggcagtgcag ccgcactacc agctgcccac ggccttccgc gccgagtggg
121 agccgccgga ggccagggca ccgagcgcca cgccacgccc gctgcacctg ggcttcctct
181 gcgagtacga cgcgctgccc ggcatcggcc acgcctgcgg ccacaacctc atcgctgagg
241 tcggggcggc ggcagcgctg ggcgtgaggg gggccttaga gggcctcccc aggccgcctc
301 cgccagtgaa ggtagttgtc ctgggaaccc ctgcagaaga agatggtggt ggcaaagttg
361 atttaattga agcaggggct tttacaaatc ttgatgttgt ttttatggcc aacccatcac
421 aagagaatgc tgcttatcta ccagatatgg ctgaacatga tgtgactgtg aaatactatg
481 gaaaagcatc tcattctgct tcttatccct gggaaggatt aaatgcatta gatgctgctg
541 tgctggccta taacaatctg tctgtgttca gacagcaaat gaaaccaacc tggagagttc
601 atggtataat aaaaaatggt ggtgtaaaac ccaatatcat tccctcttat tctgaattaa
661 tctattactt ccgtgcaccc tcaatgaaag aacttcaagt tttgaccaaa aaggcagaag
721 attgcttcag agctgcagct ttggcttcag ggtgcacagt ggaaattaaa ggtggagcac
781 atgattatta caatgttctt cccaataaga gcctatggaa agcctatatg gaaaatggaa
841 gaaagctagg aatagagttc atttcagaag atacaatgtt gaatggccct tcaggatcta
901 cggattttgg aaatgttagt tttgtggttc ctggaattca tccatatttt cacattggat
961 ctaatgcctt gaatcatact gaacagtaca ctgaagctgc tgggtcacag gaagctcagt
1021 tctacactct gcggacggcc aaagctctgg caatgacggc actggatgtt atttttaaac
1081 cagagttact ggaaggaatc agagaggact ttaaactgaa acttcaagaa gaacagtttg
1141 taaatgtagt agaataaaag acttaggggc cacttataaa tcaagaagac gtgatgattt
1201 ttttctttta atctctttta atgaaggcat gcttgttttt taatcttaaa ggagtaaaat
1261 tctttttacc tgataagtga ggacagggtg tggagaaaac atattaatta cctcatatct
1321 aaagtgaaaa tttttgcaaa cccgtacttg ataggattat gatattacag gagctggtat
1381 gtgatgccat tctttctttt ttttaccccg caaccactca ccttcacagt agtgatacca
1441 tttcttaacc tggaggatac atggcatcat ttttataaaa tatgttagta aacctttttg
1501 taagccttaa atgttatgtg tatttttaaa agcttaagag atttcaaacc ttatattcag
1561 aattgacacc catgagagtg ttttgtggta tagggtggta aacttgttct ctaatcgtat
1621 attaattcct ctaccagatt gtatatttga agccagtgtc tttccttttt ttgttttaag
1681 atagagcctc gctctgttgc ccaggctgaa gtgtagtggc acaatctcgg ctcactgcaa
1741 cctctgcctc ccaggttcaa gtgattctcc tgcctcagcc taccaagtag ctgggattac
1801 aggtgtgtgg caccatgccc agctaatttt tgtattttta gtagagacgg catttcacca
1861 tgttggccag gctggtctcg aactcctgac ctcaggtgat gcacctgcct cggcctacta
1921 aagtgctggg attacaggca tgagccaccg cacccggcct gccagtgtct ttttaataca
1981 catgtgtgtt ggtattttta aattgttaca gtatctagca tattgcttac tctgaatatt
2041 cagtactttt tgaataagca aatattgctt ccttgcttgg aatcatcaga gtttaaagta
2101 gcttcgtgga tggaccatga tcctaagatg agttttaatt ttgtgtttac agtcatctct
2161 tgtacaacgt ggagaagaaa agatatactt actactttgc ttcaggtaca cataagaaaa
2221 cctctttttt aaaaaaattt ttattttttt acataataga gacaggggct cgctgtagct
2281 tccaggctgg cctcaaactc ctgggctcaa gcaatcctcc tgtcttggcc tcccaaagtg
2341 ttgggatttc aggtatgaga caccacacct gcccattttt gtttggtttt ttaatgggca
2401 ggttcttgct ctcccaggct ggagtgcagt ggtgtaatca cagctcactg cagtctcgaa
2461 ctcctggact caagcagtcc tcccacctca gcctcctaaa gcactgggat tacaggcttg
2521 aggcactgca cctggccctg accatttttt aaaaaggtta ggcttagtgc aaagtttaaa
2581 attatatgat tcttaaaata ctgaattagt ttctaaacta aactagaggt ataggtggac
2641 ctgcttgagg tatctttgtt tttatggaac atttttatta catgccttta taatttttaa
2701 ttgttcacac cctgtactga aacctttttc tcaaatacca actcttggct atgttaaatt
2761 tgtagacttt aaaagatgtt atctaaatta atggtttaaa tatacaaatt gaaaatattt
2821 tctttttagt ggcaatttta aaagcaggcc ttaatatggg acctgctttt aaagtaaaat
2881 atgtggtact atgaattact aaattgctat ataccatgta atagtgagta tagctaatat
2941 ttagtatgcc ttttaaaaat tttggactgc ttttcggttt taacaaattc tccacatgtg
3001 aactactcaa gaaattttcc ctttttaatt gcctctatag cactcataag agctagggca
3061 ttaggataaa ctagaatatt ttatgtttat gaatacttgt ataaacttaa aagtgttttg
3121 atttcccaca atttcccaaa ggaatgttta tttattaaga gttgtgttga taatttaact
3181 gttacaattt cagcagttga attcagtgaa cactggttga ggagtgccta tttctaagca
3241 ctgggtgtaa gaagaaaaga cacttgcaaa ggaagagcta agattaacat aatttctttg
3301 gtttttctat tgcttgttat tattatgtaa aaactgggtg gcagttcaca aggaagattg
3361 ttgtaacaga agagtgacaa ccaatagttt tttgatcatt aaatcaaatt ttgtaaacag
3421 tggcaggagc gtggacttaa aacaaggctt gcttatttgg ttttgtcaaa gttttacgaa
3481 aatatatgat atatatttat actaaaacta tataatcctt agatttagga aagcaatcag
3541 ttaatgtctt tagcacacta aagcagtatt aaacacaggt acaagttgga aattgtagaa
3601 aactgaaaga aaacaagaca aaatgtctat ggtagggaat aaaagagttt aagatattat
3661 gtaaaattat gtgtattttc ttctctttta cataaattgt ttgtgaaaag tgtgctcaac
3721 ttttttacaa gagtgatatt aacttggatt tatttttcaa tataatttgg agaccctttg
3781 ttatccaaat aaaattgatg agtttctgtg cctgtaaaaa aaaaaaaaaa aaaaagaaaa
3841 gaaaagacac tgttgcatgc cccagaaagc ttgtggtggg tggtaagttc tcacgagatt
3901 tatttatctg agcaacattg ggactgaggg aacatctgaa agctaccatc ttgaaaattt
3961 ttgaggaagt gtttctgaaa tatttaaaaa tacttaagtc agtcattttg aacaaaagaa
4021 attgatacaa taagtttttt tttttaagga tgattgtcta attttgtaat atgttgtttt
4081 ttaaaaacct gtctgatggt gttttataca tttctaactt tttacctgag ttatctcttt
4141 agtcttttgg aaaataccct acacaatact aacctttaaa actatcaaat ttttgttata
4201 agataaatgt tatctttgta ctagatagca accctttata aggttgtaag gtataataaa
4261 ctgcttattt ttttacatac ttcatatcaa gcattttgca gtccaattat atagttgagg
4321 atggtgtatt ttgatatgta tgaagttaat attttcaagt aagcaatcag tctactacca
4381 tcagattata agcttttttg taataatagg tacataaaat gtgtatgaaa aatctacaat
4441 aaacatgttt atctgaaaaa aaaaaaaaaa a
//