LOCUS BC045546 2958 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens glutamate receptor, ionotrophic, AMPA 4, mRNA (cDNA
clone IMAGE:5265048), complete cds.
ACCESSION BC045546
VERSION BC045546.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2958)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2958)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: i Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557630
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2958
/db_xref="H-InvDB:HIT000052932"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5265048"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2958
/gene="GRIA4"
/gene_synonym="GLUR4C"
/gene_synonym="GLURD"
/db_xref="GeneID:2893"
/db_xref="HGNC:HGNC:4574"
/db_xref="MIM:138246"
CDS 441..1742
/gene="GRIA4"
/gene_synonym="GLUR4C"
/gene_synonym="GLURD"
/codon_start=1
/product="glutamate receptor, ionotrophic, AMPA 4"
/protein_id="AAH45546.1"
/db_xref="GeneID:2893"
/db_xref="HGNC:HGNC:4574"
/db_xref="MIM:138246"
/translation="MRIISRQIVLLFSGFWGLAMGAFPSSVQIGGLFIRNTDQEYTAF
RLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQYSRGVFAIFGLYDKRS
VHTLTSFCSALHISLITPSFPTEGESQFVLQLRPSLRGALLSLLDHYEWNCFVFLYDT
DRGYSILQAIMEKAGQNGWHVSAICVENFNDVSYRQLLEELDRRQEKKFVIDCEIERL
QNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGGANVTGFQLVDFNTPMVIKLM
DRWKKLDQREYPGSETPPKYTSALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLAN
PAAPWGQGIDMERTLKQVRIQGLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVGYWND
MDKLVLIQDVPTLGNDTAAIENRTVVVTTIMPLMKNPILRN"
BASE COUNT 913 a 534 c 661 g 850 t
ORIGIN
1 agaagagggc taggctgaga gggaagccag gactgtagga gagggaggca gcccgtcctc
61 ctcacgaacc tgcaaggatg cggcaggggc ctgggggcat ggggaggtac taaccccccg
121 gagcccccga ttggggcttg cagacctggc ccgtgggcgg attttctgcc tagcgcagcc
181 gagaagcaga ggtgccagga aaaccaagag aggggcgctg ggggtgccca tccccagagt
241 cggtccctct gcgaaccgag gaagaaaaga ggagggagtc agcgagtggt cagaagggaa
301 aacctgacac cagactggct ccggagcgtc cgggagactg gggcgctccg cgccatcgtc
361 ttcaatgctt ctctgaacag cctttaggaa gagtgcgaga gaaagagaga gagcgcgcgc
421 cagggagagg agaaaagaag atgaggatta tttccagaca gattgtcttg ttattttctg
481 gattttgggg actcgccatg ggagcctttc cgagcagcgt gcaaataggt ggtctcttca
541 tccgaaacac agatcaggaa tacactgctt ttcgattagc aatttttctt cataacacca
601 gccccaatgc gtcggaagct ccttttaatt tggtacctca tgtggacaac attgagacag
661 ccaacagttt tgctgtaaca aacgccttct gttcccagta ttctagagga gtatttgcca
721 tttttggact ctatgataag aggtcggtac ataccttgac ctcattctgc agcgccttac
781 atatctccct catcacacca agtttcccta ctgaggggga gagccagttt gtgctgcaac
841 taagaccttc gttacgagga gcactcttga gtttgctgga tcactacgaa tggaactgtt
901 ttgtcttcct gtatgacaca gacaggggat actcgatact ccaagctatt atggaaaaag
961 caggacaaaa tggttggcat gtcagcgcta tatgtgtgga aaattttaat gatgtcagct
1021 ataggcaact tctagaagaa cttgacagaa gacaagagaa gaagtttgta atagactgtg
1081 agatagagag acttcaaaac atattagaac agattgtaag tgttggaaag catgttaaag
1141 gctaccatta tatcattgca aacttgggat tcaaggatat ttctcttgag aggtttatac
1201 atggtggagc caatgttact ggattccagt tggtggattt taatacacct atggtaatca
1261 aactaatgga tcgctggaag aaactagatc agagagagta tccaggatct gagactcctc
1321 caaagtacac ctctgctctg acttatgatg gagtccttgt gatggctgaa actttccgaa
1381 gtcttaggag gcagaaaatt gatatctcaa ggagaggaaa tgctggggat tgtctggcaa
1441 atcctgctgc tccatggggc cagggaattg acatggagag gacactcaaa caggttcgaa
1501 ttcaagggct gacagggaat gttcagtttg accactatgg acgtagagtc aattacacaa
1561 tggatgtgtt tgagctgaaa agcacaggac ctagaaaggt tggttactgg aatgatatgg
1621 ataagttagt cttgattcaa gatgtaccaa ctcttggcaa tgacacagct gctattgaga
1681 acagaacagt ggttgtaacc acaattatgc ctctgatgaa gaatcctatt ttaagaaatt
1741 gatcaagaaa gaaaagagtt ccgcgctgtt cgaccattcc taactaaggc tcaagtcttg
1801 ttctccagtg tagtaaattt aagcttattt ttcatgtggg attcttcttg gatgaccaac
1861 tctggactac cagaaaaaaa aaattttaag ttctgtgact tttctgagat actagaacaa
1921 aagaagaatt aatcttcatc tttctcaaga aatagatgtt gacaaagaat cacttagcga
1981 ttctgacata tcaattcccc tatcttgaaa tgaggtcact gtatgtaaat gatggaatta
2041 tatcactcca tttccaaggg tagattttct ataagtaaat atctcggaat ttgtgtgctt
2101 gttttctgaa tatatacagt tgttttcttt aaagatctct tggaattttg cctgttctgt
2161 gtgaaataaa gtgttttaat gtgcattata ggtatgatat agagaatctc ctttccatcc
2221 ttgttactaa agggactgga caaataaatc ttaaaaccaa aatactgaat taattttgca
2281 agcatggcta gtttttagga agcatgctat caaaaaaaaa aagactaaaa atgactgaaa
2341 aaatccaact gttttatata tatataaata tatatatatt tatatatata tataaaggat
2401 attctgtaaa gttatatgtt gtttgacagt aaagccatca atatttttgc tatcaaaata
2461 gtataatact agtatctttt tgtatgaaaa tgtaatcttt atataaataa tacctctgat
2521 atttgcaact gcataatcgt tcagtaattc aaaaagacat actagaatcc tttttctgaa
2581 agtgttcctt caatttgctt ttgttgaaaa cggtagtcca ggacctatga tatccctcca
2641 cttcattcat tatgaaagaa atcccttgta gataaacaag atattggcat ctgcatgtaa
2701 ttatccccag attcagctga aaactcccaa cacagatgga attggctaga cattttaata
2761 tatgtgatac ctatatctag atatagaagg ctgagagtga gcactggata taattcattt
2821 tgattgaaat tgatatggtg ttattgttct tccagttgtc tgtcctttgt gtatgttctt
2881 atttatatgt tgatacactg taacactata tgctattgct aaataaaatt gattgagaaa
2941 ttcaaaaaaa aaaaaaaa
//