LOCUS BC045191 2888 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens fibrous sheath interacting protein 1, mRNA (cDNA clone
MGC:44442 IMAGE:5297527), complete cds.
ACCESSION BC045191
VERSION BC045191.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2888)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2888)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC045191.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: o Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222280.
FEATURES Location/Qualifiers
source 1..2888
/db_xref="H-InvDB:HIT000052924"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44442 IMAGE:5297527"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2888
/gene="FSIP1"
/gene_synonym="FLJ35989"
/gene_synonym="HSD10"
/db_xref="GeneID:161835"
/db_xref="HGNC:HGNC:21674"
CDS 211..1956
/gene="FSIP1"
/gene_synonym="FLJ35989"
/gene_synonym="HSD10"
/codon_start=1
/product="fibrous sheath interacting protein 1"
/protein_id="AAH45191.1"
/db_xref="GeneID:161835"
/db_xref="HGNC:HGNC:21674"
/translation="MDIIKGNLDGISKPASNSRIRPGSRSSNASLEVLSTEPGSFKVD
TASNLNSGKEDHSESSNTENRRTSNDDKQESCSEKIKLAEEGSDEDLDLVQHQIISEC
SDEPKLKELDSQLQDAIQKMKKLDKILAKKQRREKEIKKQGLEMRIKLWEEIKSAKYS
EAWQSKEEMENTKKFLSLTAVSEETVGPSHEEEDTFSSVFHTQIPPEEYEMQMQKLNK
DFTCDVERNESLIKSGKKPFSNTEKIELRGKHNQDFIKRNIELAKESRNPVVMVDREK
KRLVELLKDLDEKDSGLSSSEGDQSGWVVPVKGYELAVTQHQQLAEIDIKLQELSAAS
PTISSFSPRLENRNNQKPDHDGERNMEVTPGEKILRNTKEQRDLHNRLREIDEKLKMM
KENVLESTSRLSEEQLKCLLDECILKQKSIIKLSSERKKEDIEDVTPVFPQLSRSIIS
KLLNESETKVQKTEVEDADMLESEECEASKGYYLTKALTGHNMSEALVTEAENMKCLQ
FSKDVIISDTKDYFMSKTLGIGRLKRPSFLDDPLYGISVSLSSEDQHLKLSSPENTIA
DEQETKDAAEECKEP"
BASE COUNT 1002 a 479 c 628 g 779 t
ORIGIN
1 ggttgccagg gaaacagcgg tcccacaggc aggagggatc tggaccggcg gcttcttcca
61 ctaccagaga ggctgaggtg gcgggagaga cccctctcct ctgggggtaa gtggctggcg
121 cggcgagtgt ctgcggcgcg cttctgcggc catctgcgcc ctgactgacg gcggccagtt
181 cctcgaggag gcccggcggg aaggatttca atggatatta taaagggaaa cctagatgga
241 atttcaaaac cagcttcaaa ttcaagaata cgccctggga gcagaagttc aaatgcttct
301 ttggaggtgc tctcaacaga accaggatcc ttcaaggtcg atactgcaag caacttgaac
361 tctggtaaag aggaccactc cgaaagcagt aatacagaga acagaagaac tagtaatgat
421 gataagcagg aaagctgctc tgagaaaata aaattggctg aagagggatc agatgaagat
481 ctggatttgg ttcaacatca gataatctct gagtgttcag atgaacccaa attaaaagaa
541 ttagattctc aacttcaaga tgctattcag aagatgaaaa aacttgataa aatattggca
601 aagaaacaac gcagagaaaa agaaattaag aagcaaggtc tagaaatgag aataaagctg
661 tgggaagaaa ttaagtctgc aaaatatagt gaagcttggc aaagtaaaga ggagatggaa
721 aatacaaaaa aatttttatc tttgactgct gtttctgaag aaactgttgg tccttctcat
781 gaggaggaag acaccttttc ctcagtgttt catactcaaa tccctccaga agaatatgaa
841 atgcagatgc agaaactcaa taaagatttt acctgtgatg tggaaagaaa tgagtcattg
901 atcaaatcag gaaagaaacc tttctcgaat acagaaaaga ttgagctcag gggtaaacac
961 aaccaggatt ttattaagag aaacattgag ttggccaagg aatcaagaaa cccagtggtt
1021 atggttgaca gagagaagaa aaggctggtt gagcttttga aggacttgga tgagaaagat
1081 tccgggctct ccagttctga gggtgatcag tctggctggg tggtcccagt aaaaggatat
1141 gaacttgcag tcacccagca tcagcagctt gctgaaattg atataaaact ccaagaactc
1201 tctgcagcct cccctacaat ttccagtttt tctccaagac ttgaaaatcg gaataatcag
1261 aaacctgacc atgatggtga aagaaatatg gaagtaactc caggagaaaa gatacttagg
1321 aacaccaaag agcaacgcga tctgcataat cggctgagag agattgatga aaagctgaaa
1381 atgatgaagg aaaatgtgtt agagtccaca tcacgtctct ctgaagaaca gttaaagtgt
1441 cttctggatg aatgcatact taaacaaaaa tccatcatta aactttcttc agaaagaaaa
1501 aaggaagaca ttgaggacgt aacacctgtg ttcccccagc tttccaggtc catcatctct
1561 aaattgctaa atgaatcaga aacaaaggtc cagaaaactg aggtagaaga tgcagatatg
1621 cttgagagtg aagaatgtga agcttctaaa ggctactatc tcactaaagc cttgactgga
1681 cataatatgt cagaagctct tgtcactgaa gcagagaata tgaaatgcct tcaattttcc
1741 aaggacgtta ttattagtga cacaaaagac tattttatgt cgaagactct tggcattggg
1801 agactgaaaa ggccctcctt cttagatgat ccactgtatg gtatcagtgt gagcctttca
1861 tcagaagacc aacatctgaa actcagttct ccagagaata caatagcaga tgagcaggag
1921 actaaagatg cagcagaaga atgtaaagaa ccctaatcaa ggacttgctg ggtgtgcttt
1981 tcagaaagtt ggtaatgaag ttaaattaaa tttcttattg aattatttga attcaatgaa
2041 tgcactgcag agactattct ttattgattt tgacatttgg agtcgctctt tgtggattat
2101 atttccttga tatttttgag acttggggtg taattgttca gtggtttttg ctcattaaaa
2161 tttctgggac cattgtttat aaatttattg ctaatcttac agtattagga ttcattataa
2221 aaaccaacat tttaatgtat acgtgttagg gtaaaactcg ttgaagtgct gtgattgtcc
2281 tgtattcaat tttgtatgtt tcacctctac tgtgattcag acagatcatg gtggtcactg
2341 ggaatttttg ctgtggccct gcttttcctt cttcccactt gtctcatgtc tgtgaaactg
2401 gtacaacctg ccataagatg aaatgaattg tctcaacaaa gcaatattag aagagccttt
2461 actatcttat tggtgatgac acgtttctta agtaggagtt tgagtgaatt atttgatata
2521 ttactttgtt aataatagtt aacaatagtt tcttattttc tttcagagtt tgggcctttt
2581 agattgcatc aaataaaaat gagctacttt aaaagacagt ctgcggtact attttaagag
2641 agatggttta gttacaagtc agtaacttag attcatgaga aaattttgtg ttgacattcc
2701 ataagatgag ttggcattag aattggaagt ccagtttatt tctgaatcaa aaaatgagcg
2761 ggctattgtg ctgcctttaa taaaatttga gtgatgtata cataaaaaaa aaaaaaaaaa
2821 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa agaaaaaaaa
2881 aaaaaaaa
//